NDB ID: PR0151


Title:RO AUTOANTIGEN COMPLEXED WITH RNAS
Molecular Description:
60-kDa SS-A/Ro ribonucleoprotein/RNA complex
Structural Features:A DOUBLE HELIX, OVERHANGING BASES
Nucleic Acid Sequence:
ChainsC, E, G, H: G C (IU) G G U C C G A
ChainsD, F: (IU) (IU) G A C (IU) A G C C
Protein Sequence:
ChainsA, B: Click here for sequence.
Primary Citation:Stein, A.J., Fuchs, G., Fu, C., Wolin, S.L., Reinisch, K.M.
Structural Insights into RNA Quality Control: The Ro Autoantigen Binds Misfolded RNAs via Its Central Cavity
Cell (Cambridge,Mass.) , 121, pp. 529 - 539, 2005.
Experimental Information:X-RAY DIFFRACTION
Space Group: 21   1
Cell Constants:
a = 60.30b = 153.65c = 80.56(Ångstroms)
= 90 = 92.8 = 90(degrees)
Crystallization Conditions:
Method:VAPOR DIFFUSION, HANGING DROP
Drop:MPD, sodium acetate, magnesium acetate, DTT
Reservoir:MPD, sodium acetate, magnesium acetate, DTT
Refinement:The structure was refined using the CNS 1.1 program. The R value is 20.2 for 70300 reflections in the resolution range 20. to 2.20 Ångstroms with Fobs > 0.0 sigma(Fobs).

Biological Unit 1
Other Views
Asymmetric Unit
RNA View
RNAML File

Biological Units
Enlarge Biological Unit 1
Enlarge Biological Unit 2



Coordinate + Structure Data

Asymmetric Unit coordinates (pdb format, Unix compressed(.gz))

Asymmetric Unit coordinates (cif format, Unix compressed(.gz))

Biological Unit coordinates (pdb format)12

Structure Factors (cif format)

XML | Complete with coordinates (xml format, GNU compressed(.gz))
XML | Coordinates only (xml format, GNU compressed(.gz))
XML | Header only (xml format, GNU compressed(.gz))

Derivative Data

Nucleic Acid Backbone Torsions

Base Pair Parameters

Base Pair Step Parameters

Hydrogen Bonding Classification

Links

The Protein Data Bank: 1YVP

PubMed: 15907467




ndbadmin@ndbserver.rutgers.edu
©1995-2007 The Nucleic Acid Database Project
Rutgers, The State University of New Jersey