NDB ID: PR0186


Title:SEQUENCE SPECIFIC RECOGNITION OF RNA HAIRPINS BY THE SAM DOMAIN OF VTS1
Molecular Description:Protein VTS1/RNA Complex
Structural Features:SINGLE STRAND, HAIRPIN LOOP
Nucleic Acid Sequence:
ChainB:U A A U C U U U G A C A G A U U
Protein Sequence:
ChainA: Click here for sequence.
Primary Citation:Aviv, T., Lin, Z., Ben-Ari, G., Smibert, C.A., Sicheri, F.
Sequence-specific recognition of RNA hairpins by the SAM domain of Vts1p.
Nat.Struct.Mol.Biol. , 13, pp. 168 - 176, 2006.
Experimental Information:X-RAY DIFFRACTION
Space Group: 21   21   21
Cell Constants:
a = 27.550b = 44.530c = 129.230(Ångstroms)
= 90.00 = 90.00 = 90.00(degrees)
Refinement:The structure was refined using the REFMAC 5.2.0005 program. The R value is 22.8 for 11366 reflections in the resolution range 64.550 to 2.000 Ångstroms with Fobs > 0.00 sigma(Fobs).

Biological Unit 1
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Coordinate + Structure Data

Asymmetric Unit coordinates (pdb format, Unix compressed(.gz))

Asymmetric Unit coordinates (cif format, Unix compressed(.gz))

Biological Unit coordinates (pdb format)

Structure Factors (cif format)

XML | Complete with coordinates (xml format, GNU compressed(.gz))
XML | Coordinates only (xml format, GNU compressed(.gz))
XML | Header only (xml format, GNU compressed(.gz))

Derivative Data

Nucleic Acid Backbone Torsions

Base Pair Parameters

Base Pair Step Parameters

Hydrogen Bonding Classification

Links

The Protein Data Bank: 2F8K

PubMed: 16429151




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