NDB ID: PRV022


Title:HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 REVERSE TRANSCRIPTASE COMPLEXED WITH A 33-BASE NUCLEOTIDE RNA PSEUDOKNOT
Molecular Description:
HIV-1 REVERSE TRANSCRIPTASE/RNA PSEUDOKNOT COMPLEX
Structural Features:SINGLE STRAND, LOOPS, FLIPPED-OUT BASES, OVERHANGING BASES
Nucleic Acid Sequence:
ChainsC,F,I,L:A G A U U C C G U U U U C A G U C G G G A A A A A C U G A A
Protein Sequence:
ChainsA,D,G,J: Click here for sequence.
ChainsB,E,H,K: Click here for sequence.
Primary Citation:Jaeger, J., Restle, T., Steitz, T.A.
The structure of HIV-1 reverse transcriptase complexed with an RNA pseudoknot inhibitor.
EMBO J. , 17, pp. 4535 - 4542, 1998.
Experimental Information:X-RAY DIFFRACTION
Space Group: 1
Cell Constants:
a = 166.700b = 169.200c = 331.400(Ångstroms)
= 90.00 = 104.50 = 90.00(degrees)
Refinement:The structure was refined using the X-PLOR 3.853 program. The R value is 34.0 for 32343 reflections in the resolution range 30.0 to 4.75 Ångstroms with Fobs > 1.1 sigma(Fobs).

Biological Assembly 1
Other Views
Asymmetric Unit
RNA View
RNAML File

Biological Assemblies
Enlarge Biological Assembly 1
Enlarge Biological Assembly 2
Enlarge Biological Assembly 3
Enlarge Biological Assembly 4



Coordinate + Structure Data

Asymmetric Unit coordinates (pdb format, Unix compressed(.gz))

Asymmetric Unit coordinates (cif format, Unix compressed(.gz))

Biological Assembly coordinates (pdb format)1234

XML | Complete with coordinates (xml format, GNU compressed(.gz))
XML | Coordinates only (xml format, GNU compressed(.gz))
XML | Header only (xml format, GNU compressed(.gz))

Derivative Data

Nucleic Acid Backbone Torsions

Base Pair Parameters

Base Pair Step Parameters

Hydrogen Bonding Classification

Links

The RCSB Protein Data Bank: 1HVU

PubMed: 9687519




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