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| NDB ID: PTR012 | View PTR012 NDB Atlas Page |
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Base Pair Step Parameters
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| step_number | step_name | shift | slide | rise | tilt | roll | twist | x_displacement | y_displacement | helical_rise | inclination | tip | helical_twist |
| 1 | DD_G1C2:G71C72_DD | -0.388 | -2.078 | 3.163 | 0.371 | -2.563 | 29.279 | -3.550 | 0.845 | 3.324 | -5.059 | -0.732 | 29.391 |
| 2 | DD_C2G3:C70G71_DD | 0.136 | -1.743 | 3.041 | -3.456 | 10.926 | 33.948 | -4.173 | -0.644 | 2.361 | 18.084 | 5.720 | 35.776 |
| 3 | DD_G3G4:U69C70_DD | -0.223 | -2.151 | 2.719 | -2.731 | 9.538 | 25.362 | -6.293 | -0.018 | 1.819 | 20.741 | 5.937 | 27.204 |
| 4 | DD_G4A5:U68U69_DD | -0.410 | -1.679 | 3.359 | -1.405 | 2.369 | 35.510 | -3.094 | 0.464 | 3.257 | 3.876 | 2.299 | 35.613 |
| 5 | DD_A5U6:A67U68_DD | 0.162 | -1.460 | 3.522 | -2.028 | 13.665 | 30.175 | -4.831 | -0.621 | 2.618 | 24.688 | 3.663 | 33.120 |
| 6 | DD_U6U7:A66A67_DD | -0.019 | -1.065 | 3.221 | -3.223 | 9.216 | 34.403 | -2.995 | -0.409 | 2.841 | 15.205 | 5.317 | 35.721 |
| 7 | DD_U75MC49:G65A66_DD | -0.341 | -1.702 | 2.944 | 8.246 | 7.467 | 32.280 | -3.891 | 1.672 | 2.349 | 12.959 | -14.311 | 34.095 |
| 8 | DD_5MC49U50:A64G65_DD | -0.374 | -2.383 | 3.296 | -7.348 | 15.222 | 36.235 | -5.049 | -0.202 | 2.194 | 23.000 | 11.103 | 39.863 |
| 9 | DD_U50G51:C63A64_DD | -0.958 | -1.863 | 2.905 | -4.490 | 3.581 | 31.884 | -3.895 | 1.024 | 2.790 | 6.454 | 8.091 | 32.384 |
| 10 | DD_G51U52:A62C63_DD | 0.080 | -1.577 | 3.492 | -2.365 | 3.059 | 27.784 | -4.006 | -0.746 | 3.285 | 6.331 | 4.895 | 28.047 |
| 11 | DD_U52G53:C61A62_DD | -0.424 | -1.452 | 3.368 | 2.003 | 4.820 | 43.161 | -2.429 | 0.767 | 3.174 | 6.524 | -2.711 | 43.461 |
| 12 | DD_G535MU54:1MA58C61_DD | -1.300 | -1.626 | 3.032 | -0.904 | 0.141 | 87.132 | -1.182 | 0.925 | 3.041 | 0.102 | 0.656 | 87.136 |
| 13 | DD_5MU54PSU55:G181MA58_DD | 2.351 | -2.294 | 3.457 | 8.239 | 1.650 | 36.712 | -3.796 | -2.445 | 3.775 | 2.579 | -12.874 | 37.629 |
| 14 | DD_PSU55G57:G20G18_DD | -3.428 | 5.644 | -1.800 | 133.309 | -29.436 | 66.247 | 2.581 | 0.050 | -4.769 | -16.755 | -75.880 | 143.857 |
| 15 | DD_G57C56:G19G20_DD | 2.760 | 0.356 | -3.005 | 26.229 | 6.601 | -105.937 | -0.135 | 1.365 | -3.440 | -4.092 | 16.259 | -108.315 |
| 16 | DD_A38PSU39:A31OMC32_DD | -1.538 | 2.799 | -0.478 | 159.538 | 22.350 | -136.358 | -1.395 | -0.818 | -0.027 | -11.268 | 80.429 | -173.000 |
| 17 | DD_PSU395MC40:G30A31_DD | 2.482 | -4.789 | -1.186 | 148.878 | -86.886 | 175.633 | -2.405 | -1.259 | -1.012 | -43.444 | -74.442 | 179.710 |
| 18 | DD_5MC40U41:A29G30_DD | 0.818 | -1.184 | 3.281 | 2.325 | 19.388 | 32.405 | -4.148 | -0.989 | 2.291 | 31.437 | -3.769 | 37.698 |
| 19 | DD_U41G42:C28A29_DD | 0.082 | -0.858 | 3.974 | -1.052 | 20.465 | 31.564 | -4.419 | -0.285 | 2.905 | 33.564 | 1.725 | 37.491 |
| 20 | DD_G42G43:C27C28_DD | -1.184 | -1.519 | 3.211 | -10.057 | -0.540 | 39.119 | -2.139 | 0.548 | 3.420 | -0.791 | 14.725 | 40.345 |
| 21 | DD_G43A44:M2G26C27_DD | -0.748 | -2.345 | 2.970 | 4.257 | 0.589 | 30.589 | -4.506 | 2.136 | 2.798 | 1.110 | -8.019 | 30.882 |
| 22 | DD_A442MG10:C25M2G26_DD | -3.380 | -3.307 | 2.967 | 22.357 | 1.703 | 51.502 | -3.598 | 4.508 | 1.398 | 1.862 | -24.452 | 55.864 |
| 23 | DD_2MG10C11:G24C25_DD | -0.155 | -1.331 | 2.808 | 9.803 | 4.454 | 38.744 | -2.361 | 1.155 | 2.535 | 6.561 | -14.440 | 40.157 |
| 24 | DD_C11U12:A23G24_DD | 0.724 | -1.294 | 4.215 | -14.442 | 17.855 | 44.918 | -3.070 | -2.102 | 3.163 | 21.771 | 17.609 | 50.176 |
| 25 | DD_U12C13:G22A23_DD | 0.130 | -2.649 | 1.823 | 20.381 | -1.959 | 17.240 | -5.419 | 2.998 | 1.474 | -4.814 | -50.081 | 26.707 |
| 26 | DD_C13A14:U8G22_DD | -1.070 | -0.048 | 3.982 | -8.848 | 12.110 | 70.725 | -0.542 | 0.544 | 4.023 | 10.346 | 7.559 | 72.094 |
| 27 | DD_A14G15:C48U8_DD | 0.185 | -4.418 | 2.967 | 5.020 | -3.745 | -71.466 | 3.882 | 0.306 | 2.747 | 3.200 | 4.290 | -71.704 |
| 28 | DD_G15H2U16:U59C48_DD | -1.175 | -1.087 | 1.614 | 11.607 | 20.164 | -6.318 | -2.962 | 0.389 | 1.900 | -65.013 | 37.423 | -24.097 |
| 29 | EE_G1C2:G71C72_EE | -0.434 | -1.920 | 3.305 | -0.669 | -3.759 | 28.436 | -2.987 | 0.717 | 3.533 | -7.609 | 1.355 | 28.686 |
| 30 | EE_C2G3:C70G71_EE | 0.267 | -1.670 | 3.174 | -2.239 | 10.578 | 34.585 | -4.022 | -0.712 | 2.549 | 17.277 | 3.656 | 36.187 |
| 31 | EE_G3G4:U69C70_EE | 0.054 | -2.248 | 2.696 | -3.995 | 9.445 | 24.986 | -6.510 | -0.832 | 1.718 | 20.750 | 8.775 | 26.978 |
| 32 | EE_G4A5:U68U69_EE | -0.188 | -1.745 | 3.111 | -0.378 | 2.033 | 34.540 | -3.227 | 0.262 | 3.008 | 3.420 | 0.635 | 34.600 |
| 33 | EE_A5U6:A67U68_EE | 0.165 | -1.580 | 3.745 | -2.040 | 18.284 | 32.385 | -4.994 | -0.539 | 2.514 | 29.959 | 3.343 | 37.124 |
| 34 | EE_U6U7:A66A67_EE | -0.095 | -1.090 | 2.906 | 0.561 | 11.748 | 29.561 | -3.775 | 0.259 | 2.313 | 21.961 | -1.049 | 31.766 |
| 35 | EE_U75MC49:G65A66_EE | -0.444 | -1.272 | 3.197 | -0.606 | 4.713 | 39.583 | -2.386 | 0.585 | 3.038 | 6.929 | 0.891 | 39.856 |
| 36 | EE_5MC49U50:A64G65_EE | -0.321 | -2.354 | 3.285 | -1.210 | 9.109 | 34.028 | -5.133 | 0.366 | 2.598 | 15.223 | 2.022 | 35.211 |
| 37 | EE_U50G51:C63A64_EE | -0.664 | -1.914 | 2.816 | -3.522 | 4.347 | 32.714 | -3.961 | 0.670 | 2.602 | 7.647 | 6.197 | 33.176 |
| 38 | EE_G51U52:A62C63_EE | 0.150 | -1.633 | 3.401 | 3.395 | 4.194 | 27.418 | -4.386 | 0.502 | 3.116 | 8.740 | -7.076 | 27.934 |
| 39 | EE_U52G53:C61A62_EE | -0.036 | -1.568 | 3.661 | 0.230 | 8.247 | 44.260 | -2.851 | 0.069 | 3.332 | 10.835 | -0.302 | 44.984 |
| 40 | EE_G535MU54:1MA58C61_EE | -1.410 | -1.751 | 2.900 | -0.466 | 2.162 | 86.878 | -1.315 | 1.016 | 2.871 | 1.572 | 0.339 | 86.900 |
| 41 | EE_5MU54PSU55:G181MA58_EE | 2.243 | -2.286 | 3.229 | 7.517 | 0.590 | 38.199 | -3.507 | -2.411 | 3.556 | 0.892 | -11.352 | 38.909 |
| 42 | EE_PSU55G57:G20G18_EE | -3.273 | 6.318 | -2.045 | 130.803 | -28.211 | 64.723 | 2.941 | -0.154 | -4.892 | -16.264 | -75.409 | 141.301 |
| 43 | EE_G57C56:G19G20_EE | 2.666 | 0.514 | -2.362 | 29.081 | 4.588 | -101.908 | -0.272 | 1.350 | -2.861 | -2.913 | 18.462 | -104.927 |
| 44 | EE_PSU395MC40:G30A31_EE | 0.075 | -1.729 | 3.066 | -4.467 | 9.157 | 39.415 | -3.382 | -0.544 | 2.594 | 13.309 | 6.492 | 40.660 |
| 45 | EE_5MC40U41:A29G30_EE | -0.216 | -1.278 | 3.350 | -2.499 | 9.915 | 33.715 | -3.552 | -0.006 | 2.879 | 16.627 | 4.191 | 35.188 |
| 46 | EE_U41G42:C28A29_EE | -0.349 | -0.882 | 3.144 | 0.830 | -2.876 | 36.950 | -1.013 | 0.656 | 3.193 | -4.529 | -1.307 | 37.067 |
| 47 | EE_G42G43:C27C28_EE | 0.490 | -1.765 | 3.415 | 5.179 | 4.861 | 28.126 | -4.611 | 0.179 | 3.111 | 9.805 | -10.448 | 28.991 |
| 48 | EE_G43A44:M2G26C27_EE | -0.972 | -1.481 | 3.433 | 8.869 | 1.424 | 37.441 | -2.427 | 2.588 | 3.076 | 2.180 | -13.579 | 38.466 |
| 49 | EE_A442MG10:C25M2G26_EE | -1.886 | -2.835 | 2.827 | 19.756 | 14.487 | 53.538 | -3.413 | 2.628 | 1.367 | 15.218 | -20.754 | 58.498 |
| 50 | EE_2MG10C11:G24C25_EE | -1.230 | -0.752 | 2.660 | -1.549 | 2.698 | 41.001 | -1.309 | 1.615 | 2.650 | 3.845 | 2.207 | 41.113 |
| 51 | EE_C11U12:A23G24_EE | -0.599 | -0.985 | 3.909 | -11.404 | 26.719 | 35.010 | -4.019 | -0.389 | 2.642 | 37.470 | 15.993 | 45.200 |
| 52 | EE_U12C13:G22A23_EE | 0.533 | -2.240 | 2.815 | 0.233 | -7.604 | 28.457 | -2.862 | -1.001 | 3.294 | -15.130 | -0.464 | 29.436 |
| 53 | EE_C13A14:U8G22_EE | -2.110 | -0.777 | 3.316 | -6.644 | -6.653 | 63.584 | -0.430 | 1.684 | 3.555 | -6.278 | 6.270 | 64.203 |
| 54 | EE_A14G15:C48U8_EE | 1.087 | -3.410 | 3.184 | 2.461 | 13.246 | -70.388 | 2.443 | 1.018 | 3.658 | -11.387 | 2.116 | -71.502 |
| 55 | EE_G15H2U16:U59C48_EE | -1.152 | 0.441 | 3.183 | 0.228 | -12.504 | 173.243 | 0.231 | 0.577 | 3.180 | -6.263 | -0.114 | 173.284 |
| 56 | FF_G1C2:G71C72_FF | -0.316 | -2.004 | 3.262 | 1.693 | -3.824 | 26.263 | -3.315 | 1.148 | 3.486 | -8.348 | -3.696 | 26.588 |
| 57 | FF_C2G3:C70G71_FF | 0.094 | -1.604 | 3.105 | -2.330 | 13.248 | 36.498 | -3.817 | -0.389 | 2.392 | 20.324 | 3.575 | 38.818 |
| 58 | FF_G3G4:U69C70_FF | 0.141 | -2.161 | 2.846 | -2.320 | 5.416 | 23.760 | -6.437 | -0.906 | 2.280 | 12.901 | 5.527 | 24.470 |
| 59 | FF_G4A5:U68U69_FF | -0.245 | -1.773 | 2.990 | -1.014 | 7.686 | 34.890 | -3.846 | 0.274 | 2.560 | 12.626 | 1.665 | 35.715 |
| 60 | FF_A5U6:A67U68_FF | 0.075 | -1.633 | 3.707 | -2.429 | 16.371 | 29.902 | -5.425 | -0.519 | 2.492 | 29.092 | 4.316 | 34.085 |
| 61 | FF_U6U7:A66A67_FF | 0.232 | -0.713 | 3.082 | -2.449 | 10.170 | 36.603 | -2.277 | -0.641 | 2.772 | 15.801 | 3.804 | 38.019 |
| 62 | FF_U75MC49:G65A66_FF | -1.099 | -1.521 | 3.011 | 2.622 | 7.484 | 33.702 | -3.549 | 2.195 | 2.535 | 12.691 | -4.446 | 34.596 |
| 63 | FF_5MC49U50:A64G65_FF | -0.463 | -2.350 | 3.290 | -7.159 | 8.005 | 34.291 | -4.894 | -0.215 | 2.729 | 13.181 | 11.789 | 35.885 |
| 64 | FF_U50G51:C63A64_FF | -0.849 | -1.824 | 2.830 | -1.996 | 7.264 | 32.811 | -4.118 | 1.201 | 2.428 | 12.652 | 3.477 | 33.642 |
| 65 | FF_G51U52:A62C63_FF | -0.040 | -1.382 | 3.422 | 0.351 | 1.216 | 26.504 | -3.343 | 0.182 | 3.356 | 2.651 | -0.765 | 26.533 |
| 66 | FF_U52G53:C61A62_FF | -0.125 | -1.386 | 3.669 | 1.801 | 8.117 | 44.135 | -2.615 | 0.341 | 3.368 | 10.690 | -2.372 | 44.873 |
| 67 | FF_G535MU54:1MA58C61_FF | -1.110 | -1.384 | 2.931 | 0.428 | 2.195 | 86.411 | -1.054 | 0.819 | 2.898 | 1.603 | -0.312 | 86.435 |
| 68 | FF_5MU54PSU55:G181MA58_FF | 2.431 | -2.164 | 3.351 | 8.347 | -2.246 | 39.537 | -2.850 | -2.469 | 3.877 | -3.273 | -12.164 | 40.434 |
| 69 | FF_PSU55G57:G20G18_FF | -3.428 | 5.677 | -1.578 | 137.598 | -25.255 | 56.303 | 2.637 | -0.055 | -4.602 | -14.484 | -78.911 | 144.807 |
| 70 | FF_G57C56:G19G20_FF | 2.915 | 0.638 | -2.554 | 26.805 | 7.768 | -96.753 | -0.308 | 1.529 | -3.121 | -5.118 | 17.660 | -99.724 |
| 71 | FF_2MG10C11:G24C25_FF | -1.128 | -1.365 | 3.049 | -4.212 | 9.412 | 36.856 | -3.154 | 1.245 | 2.739 | 14.540 | 6.507 | 38.223 |
| 72 | FF_C11U12:A23G24_FF | -0.338 | -0.945 | 3.073 | -12.079 | 10.357 | 36.389 | -2.512 | -0.806 | 2.693 | 15.695 | 18.305 | 39.607 |
| 73 | FF_U12C13:G22A23_FF | 0.045 | -1.975 | 3.272 | 4.694 | -8.015 | 24.186 | -1.967 | 1.330 | 3.671 | -18.288 | -10.710 | 25.883 |
| 74 | FF_C13A14:U8G22_FF | -1.443 | -0.834 | 3.704 | -4.569 | 0.058 | 67.361 | -0.753 | 1.097 | 3.783 | 0.053 | 4.114 | 67.497 |
| 75 | FF_A14G15:C48U8_FF | 1.527 | -3.385 | 3.571 | 4.335 | 12.673 | -67.485 | 2.453 | 1.542 | 3.984 | -11.294 | 3.863 | -68.646 |
| 76 | FF_G15H2U16:U59C48_FF | 1.144 | -0.661 | 2.542 | -2.082 | 5.985 | -179.779 | 0.330 | 0.572 | 2.542 | -2.993 | -1.041 | -179.779 |
| 77 | FF_C27C28:G42G43_FF | -0.282 | -2.188 | 3.463 | -6.325 | 3.794 | 23.639 | -6.280 | -1.299 | 3.051 | 8.984 | 14.978 | 24.747 |
| 78 | FF_C28A29:U41G42_FF | -0.164 | -1.356 | 3.362 | -2.200 | 1.809 | 29.716 | -3.016 | -0.147 | 3.279 | 3.518 | 4.278 | 29.849 |
| 79 | FF_A29G30:5MC40U41_FF | 0.051 | -1.683 | 3.581 | -3.737 | 7.680 | 39.414 | -3.352 | -0.516 | 3.194 | 11.227 | 5.463 | 40.293 |
| 80 | FF_G30A31:PSU395MC40_FF | -0.145 | -1.520 | 3.303 | 4.252 | 9.894 | 37.480 | -3.421 | 0.707 | 2.796 | 15.023 | -6.455 | 38.943 |
| 81 | FF_A31OMC32:A38PSU39_FF | 0.002 | -1.888 | 2.986 | 0.187 | 22.949 | 42.492 | -3.735 | 0.010 | 1.798 | 29.256 | -0.238 | 48.040 |
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ndbadmin@ndbserver.rutgers.edu
©1995-2012 The Nucleic Acid Database Project
Rutgers, The State University of New Jersey
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