NDB ID: RR0005


Title:DETAILED VIEW OF A KEY ELEMENT OF THE RIBOSOME ASSEMBLY: CRYSTAL STRUCTURE OF THE S15-RRNA COMPLEX
Molecular Description:30S RIBOSOMAL PROTEIN S15/RNA COMPLEX
Structural Features:SINGLE STRAND, LOOPS, FLIPPED-OUT BASES
Nucleic Acid Sequence:
ChainB:G G G C G G C C U U C G G G C U A G A C G G U G G G A G A G G C U U C G G C U G G U C C A C C C G U G A C G C U C
Protein Sequence:
ChainA: Click here for sequence.
Primary Citation:Nikulin, A., Serganov, A., Ennifar, E., Tishchenko, S., Nevskaya, N., Shepard, W., Portier, C., Garber, M., Ehresmann, B., Ehresmann, C., Nikonov, S., Dumas, P.
Crystal structure of the S15-rRNA complex.
Nat.Struct.Biol. , 7, pp. 273 - 277, 2000.
Experimental Information:X-RAY DIFFRACTION
Space Group: 64   2
Cell Constants:
a = 128.800b = 128.800c = 65.100(Ångstroms)
= 90.00 = 90.00 = 120.00(degrees)
Refinement:The structure was refined using the CNS program. The R value is 21.3 for 7679 reflections in the resolution range 8.00 to 2.80 Ångstroms with Fobs > 2.00 sigma(Fobs).

Biological Assembly 1
Other Views
Asymmetric Unit
RNA View
RNAML File
Enlarge Biological Assembly 1



Coordinate + Structure Data

Asymmetric Unit coordinates (pdb format, Unix compressed(.gz))

Asymmetric Unit coordinates (cif format, Unix compressed(.gz))

Biological Assembly coordinates (pdb format)

XML | Complete with coordinates (xml format, GNU compressed(.gz))
XML | Coordinates only (xml format, GNU compressed(.gz))
XML | Header only (xml format, GNU compressed(.gz))

Derivative Data

Nucleic Acid Backbone Torsions

Base Pair Parameters

Base Pair Step Parameters

Hydrogen Bonding Classification

Links

The RCSB Protein Data Bank: 1DK1

PubMed: 10742169

FR3D annotation of basepairs, stacking, motifs, and other interactions for: 1DK1




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