NDB ID: RR0010


Title:THE CRYSTAL STRUCTURE OF TWO UUCG LOOPS HIGHLIGHTS THE ROLE PLAYED BY 2'-HYDROXYL GROUPS IN ITS UNUSUAL STABILITY
Molecular Description:30S RIBOSOMAL PROTEIN S15/RNA COMPLEX
Structural Features:SINGLE STRAND, LOOPS, FLIPPED-OUT BASES, OVERHANGING BASES
Nucleic Acid Sequence:
ChainB:G G G C G G C C U U C G G G C U A G A C G G U G G G A G A G G C U U C G G C U G G U C C A C C C G U G A C G C U C
Protein Sequence:
ChainA: Click here for sequence.
Primary Citation:Ennifar, E., Nikulin, A., Tishchenko, S., Serganov, A., Nevskaya, N., Garber, M., Ehresmann, B., Ehresmann, C., Nikonov, S., Dumas, P.
The crystal structure of UUCG tetraloop.
J.Mol.Biol. , 304, pp. 35 - 42, 2000.
Experimental Information:X-RAY DIFFRACTION
Space Group: 64   2
Cell Constants:
a = 128.800b = 128.800c = 65.100(Ångstroms)
= 90.00 = 90.00 = 120.00(degrees)
Refinement:The structure was refined using the CNS 0.4 program. The R value is 22.2 for 7679 reflections in the resolution range 8.00 to 2.80 Ångstroms with Fobs > 2.0 sigma(Fobs).

Biological Assembly 1
Other Views
Asymmetric Unit
RNA View
RNAML File
Enlarge Biological Assembly 1



Coordinate + Structure Data

Asymmetric Unit coordinates (pdb format, Unix compressed(.gz))

Asymmetric Unit coordinates (cif format, Unix compressed(.gz))

Biological Assembly coordinates (pdb format)

XML | Complete with coordinates (xml format, GNU compressed(.gz))
XML | Coordinates only (xml format, GNU compressed(.gz))
XML | Header only (xml format, GNU compressed(.gz))

Derivative Data

Nucleic Acid Backbone Torsions

Base Pair Parameters

Base Pair Step Parameters

Hydrogen Bonding Classification

Links

The RCSB Protein Data Bank: 1F7Y

PubMed: 11071808

FR3D annotation of basepairs, stacking, motifs, and other interactions for: 1F7Y




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