NDB ID: RR0012


Title:CRYSTAL STRUCTURE OF RIBOSOMAL PROTEIN TL5, ONE OF THE CTC FAMILY PROTEINS, COMPLEXED WITH A FRAGMENT OF 5S RRNA.
Molecular Description:50S RIBOSOMAL PROTEIN L25/RRNA COMPLEX
Structural Features:RH DOUBLE HELIX, BULGES, FLIPPED-OUT BASES, OVERHANGING BASES
Nucleic Acid Sequence:
ChainsB, E: G C C G A U G G U A G U G U G G G G U
ChainsC, F: C C C C A U G C G A G A G U A G G G A A C
Protein Sequence:
ChainsA, D: Click here for sequence.
Primary Citation:Fedorov, R., Meshcheryakov, V., Gongadze, G., Fomenkova, N., Nevskaya, N., Selmer, M., Laurberg, M., Kristensen, O., Al-Karadaghi, S., Liljas, A., Garber, M., Nikonov, S.
Structure of ribosomal protein TL5 complexed with RNA provides new insights into the CTC family of stress proteins.
Acta Crystallogr.,Sect.D , 57, pp. 968 - 976, 2001.
Experimental Information:X-RAY DIFFRACTION
Space Group: 31   2
Cell Constants:
a = 109.904b = 109.904c = 137.511(Ångstroms)
= 90.00 = 90.00 = 120.00(degrees)
Crystallization Conditions:
Method:VAPOR DIFFUSION, HANGING DROP
Refinement:The structure was refined using the CNS program. The R value is 20.8 for 37059 reflections in the resolution range 8.0 to 2.3 Ångstroms with Fobs > 2.0 sigma(Fobs).

Biological Assembly 1
Other Views
Asymmetric Unit
RNA View
RNAML File

Biological Assemblies
Enlarge Biological Assembly 1
Enlarge Biological Assembly 2



Coordinate + Structure Data

Asymmetric Unit coordinates (pdb format, Unix compressed(.gz))

Asymmetric Unit coordinates (cif format, Unix compressed(.gz))

Biological Assembly coordinates (pdb format)12

Structure Factors (cif format)

XML | Complete with coordinates (xml format, GNU compressed(.gz))
XML | Coordinates only (xml format, GNU compressed(.gz))
XML | Header only (xml format, GNU compressed(.gz))

Derivative Data

Nucleic Acid Backbone Torsions

Base Pair Parameters

Base Pair Step Parameters

Hydrogen Bonding Classification

Links

The RCSB Protein Data Bank: 1FEU

PubMed: 11418764




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