NDB ID: RR0060


Title:STRUCTURE OF LARGE RIBOSOMAL SUBUNIT IN COMPLEX WITH VIRGINIAMYCIN M
Molecular Description:large ribosomal subunit 50S
Structural Features:SINGLE STRAND, LOOPS, BULGES, FLIPPED-OUT BASES, TETRAPLEX,BASE TRIPLET
Nucleic Acid Sequence:
ChainA:Click here for sequence.
ChainB:Click here for sequence.
Protein Sequence:
Chains1, 2, 3, 4, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, ZClick here for sequences.
Primary Citation:Hansen, J., Moore, P.B., Steitz, T.A.
Structures of Five Antibiotics Bound at the Peptidyl Transferase Center of the Large Ribosomal Subunit
J.Mol.Biol. , 330, pp. 1061 - 1075, 2003.
Experimental Information:X-RAY DIFFRACTION
Space Group: 21
Cell Constants:
a = 212.902b = 300.474c = 575.176(Ångstroms)
= 90.00 = 90.00 = 90.00(degrees)
Refinement:The structure was refined using the CNS 1.0 program. The R value is 20.1 for 327972 reflections in the resolution range 20.0 to 3.00 Ångstroms with Fobs > 0.0 sigma(Fobs).

Biological Assembly 1
Other Views
Asymmetric Unit
Enlarge Biological Assembly 1



Coordinate + Structure Data

Asymmetric Unit coordinates (pdb format, Unix compressed(.gz))

Asymmetric Unit coordinates (cif format, Unix compressed(.gz))

Biological Assembly coordinates (pdb format)

XML | Complete with coordinates (xml format, GNU compressed(.gz))
XML | Coordinates only (xml format, GNU compressed(.gz))
XML | Header only (xml format, GNU compressed(.gz))

Derivative Data

Nucleic Acid Backbone Torsions

Base Pair Parameters

Base Pair Step Parameters

Hydrogen Bonding Classification

Links

The RCSB Protein Data Bank: 1N8R

PubMed: 12860128




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