NDB ID: RR0083


Title:COMPLEX OF THE LARGE RIBOSOMAL SUBUNIT FROM DEINOCOCCUS RADIODURANS WITH QUINUPRISTIN AND DALFOPRISTIN
Molecular Description:50S RIBOSOMAL PROTEIN L33
50S RIBOSOMAL PROTEIN L34
50S RIBOSOMAL PROTEIN L35
50S RIBOSOMAL PROTEIN L36
QUINUPRISTIN
50S RIBOSOMAL PROTEIN L2
50S RIBOSOMAL PROTEIN L4
50S RIBOSOMAL PROTEIN L5
50S RIBOSOMAL PROTEIN L6
50S RIBOSOMAL PROTEIN L9
50S RIBOSOMAL PROTEIN L11
50S RIBOSOMAL PROTEIN L13
50S RIBOSOMAL PROTEIN L14
50S RIBOSOMAL PROTEIN L15
50S RIBOSOMAL PROTEIN L16
50S RIBOSOMAL PROTEIN L17
50S RIBOSOMAL PROTEIN L18
50S RIBOSOMAL PROTEIN L19
50S RIBOSOMAL PROTEIN L20
50S RIBOSOMAL PROTEIN L21
50S RIBOSOMAL PROTEIN L22
50S RIBOSOMAL PROTEIN L23
50S RIBOSOMAL PROTEIN L24
GENERAL STRESS PROTEIN CTC
50S RIBOSOMAL PROTEIN L27
50S RIBOSOMAL PROTEIN L29
50S RIBOSOMAL PROTEIN L30
50S RIBOSOMAL PROTEIN L31
50S RIBOSOMAL PROTEIN L32/RNA Complex

5-(2-DIETHYLAMINO-ETHANESULFONYL)-21-HYDROXY-10-ISOPROPYL-11,19-DIMETHYL-9,26-DIOXA-3,15,28-TRIAZA-TRICYCLO[23.2.1.00,255]OCTACOSA-1(27),12,17,19,25(28)-PENTAENE-2,8,14,23-TETRAONE
Structural Features:SINGLE STRAND
Nucleic Acid Sequence:
Chain0:Click here for sequence.
Chain9:Click here for sequence.
Protein Sequence:
Chains1, 2, 3, 4, 5, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, W, X, Y, ZClick here for sequences.
Primary Citation:Harms, J.M., Schlunzen, F., Fucini, P., Bartels, H., Yonath, A.
Alterations at the Peptidyl Transferase Centre of the Ribosome Induced by the Synergistic Action of the Streptogramins Dalfopristin and Quinupristin.
Bmc Biol. , 2, pp. 4, 2004.
Experimental Information:X-RAY DIFFRACTION
Space Group: 2
Cell Constants:
a = 168.500b = 406.000c = 693.000(Ångstroms)
= 90.00 = 90.00 = 90.00(degrees)
Refinement:The structure was refined using the CNS 1.0 program. The R value is 27.8 for 266331 reflections in the resolution range 15.00 to 3.42 Ångstroms with Fobs > 0.000 sigma(Fobs).

Biological Assembly 1
Other Views
Asymmetric Unit
Enlarge Biological Assembly 1



Coordinate + Structure Data

Asymmetric Unit coordinates (pdb format, Unix compressed(.gz))

Asymmetric Unit coordinates (cif format, Unix compressed(.gz))

Biological Assembly coordinates (pdb format)

XML | Complete with coordinates (xml format, GNU compressed(.gz))
XML | Coordinates only (xml format, GNU compressed(.gz))
XML | Header only (xml format, GNU compressed(.gz))

Derivative Data

Nucleic Acid Backbone Torsions

Base Pair Parameters

Base Pair Step Parameters

Hydrogen Bonding Classification

Links

The RCSB Protein Data Bank: 1SM1

PubMed: 15059283

FR3D annotation of basepairs, stacking, motifs, and other interactions for: 1SM1




ndbadmin@ndbserver.rutgers.edu
©1995-2013 The Nucleic Acid Database Project
Rutgers, The State University of New Jersey