NDB ID: TRNA06


Title:RESTRAINED REFINEMENT OF THE MONOCLINIC FORM OF YEAST PHENYLALANINE TRANSFER RNA. TEMPERATURE FACTORS AND DYNAMICS, COORDINATED WATERS, AND BASE-PAIR PROPELLER TWIST ANGLES
Molecular Description:TRANSFER RIBO-NUCLEIC ACID (YEAST
PHE)
T-RNA
Structural Features:T SINGLE STRAND, LOOP
Nucleic Acid Sequence:
ChainA:G C G G A U U U A (2MG) C U C A G (H2U) (H2U) G G G A G A G C (M2G) C C A G A (OMC) U (OMG) A A (YG) A (PSU) (5MC) U G G A G (7MG) U C (5MC) U G U G (5MU) (PSU) C G (1MA) U C C A C A G A A U U C G C A C C A
Primary Citation:Westhof, E., Sundaralingam, M.
Restrained refinement of the monoclinic form of yeast phenylalanine transfer RNA. Temperature factors and dynamics, coordinated waters, and base-pair propeller twist angles.
Biochemistry , 25, pp. 4868 - 4878, 1986.
Experimental Information:X-RAY DIFFRACTION
Space Group: 21   1
Cell Constants:
a = 56.000b = 33.300c = 63.000(Ångstroms)
= 90.00 = 90.40 = 90.00(degrees)
Refinement:The structure was refined using the NUCLSQ program. The R value is 16.8 for 4019 reflections in the resolution of 3.000.

Biological Assembly 1
Other Views
Asymmetric Unit
Crystal Packing
RNA View
RNAML File
Enlarge Biological Assembly 1



Coordinate + Structure Data

Asymmetric Unit coordinates (pdb format, Unix compressed(.gz))

Asymmetric Unit coordinates (cif format, Unix compressed(.gz))

Biological Assembly coordinates (pdb format)

XML | Complete with coordinates (xml format, GNU compressed(.gz))
XML | Coordinates only (xml format, GNU compressed(.gz))
XML | Header only (xml format, GNU compressed(.gz))

Derivative Data

Nucleic Acid Backbone Torsions

Base Pair Parameters

Base Pair Step Parameters

Hydrogen Bonding Classification

Links

The RCSB Protein Data Bank: 1TRA

PubMed: 3533142




ndbadmin@ndbserver.rutgers.edu
©1995-2013 The Nucleic Acid Database Project
Rutgers, The State University of New Jersey