NDB ID: UD0005


Title:INTERCALATION AND MAJOR GROOVE RECOGNITION IN THE 1.2 A RESOLUTION CRYSTAL STRUCTURE OF RH[ME2TRIEN]PHI BOUND TO 5'-G(5IU)TGCAAC-3'
Molecular Description:5'-D(Gp(5IU)pTpGpCpApApC)-3'
Structural Features:RH DOUBLE HELIX
Nucleic Acid Sequence:
ChainsA,B,C,D,E,F,G,H,I,J:(DG) (5IU) (DT) (DG) (DC) (DA) (DA) (DC)
Primary Citation:Kielkopf, C.L., Erkkila, K.E., Hudson, B.P., Barton, J.K., Rees, D.C.
Structure of a photoactive rhodium complex intercalated into DNA.
Nat.Struct.Biol. , 7, pp. 117 - 121, 2000.
Experimental Information:X-RAY DIFFRACTION
Space Group: 1
Cell Constants:
a = 94.740b = 23.980c = 96.520(Ångstroms)
= 90.00 = 93.24 = 90.00(degrees)
Refinement:The structure was refined using the SHELXL-97 program. The R value is 17.0 for 122830 reflections in the resolution range 17.0 to 1.2 Ångstroms with I > 0. sigma(I).

Biological Assembly 1
Other Views
Asymmetric Unit
Crystal Packing

Biological Assemblies
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Coordinate + Structure Data

Asymmetric Unit coordinates (pdb format, Unix compressed(.gz))

Asymmetric Unit coordinates (cif format, Unix compressed(.gz))

Biological Assembly coordinates (pdb format)12345

XML | Complete with coordinates (xml format, GNU compressed(.gz))
XML | Coordinates only (xml format, GNU compressed(.gz))
XML | Header only (xml format, GNU compressed(.gz))

Derivative Data

Nucleic Acid Backbone Torsions

Base Pair Parameters

Base Pair Step Parameters

Hydrogen Bonding Classification

Links

The RCSB Protein Data Bank: 454D

PubMed: 10655613




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