NDB ID: UD0011
Title:
CRYSTAL STRUCTURE OF THE E-DNA HEXAMER GGCGBR5CC
Molecular Description:
5'-D(GpGpCpGp(CBR)pC)-3'
Structural Features:
DOUBLE HELIX
Nucleic Acid Sequence:
Chain
s
A,B:
(DG) (DG) (DC) (DG) (CBR) (DC)
Primary Citation:
Vargason, J.M., Eichman, B.F., Ho, P.S.
The extended and eccentric E-DNA structure induced by cytosine methylation or bromination.
Nat.Struct.Biol.
,
7
, pp. 758 - 761, 2000.
Experimental Information:
X-RAY DIFFRACTION
Space Group:
P
4
3
2
1
2
Cell Constants:
a = 60.400
b = 60.400
c = 24.704
(Ångstroms)
= 90.00
= 90.00
= 90.00
(degrees)
Refinement:
The structure was refined using the X-PLOR 3.851 program. The R value is 19.3 for 2324 reflections in the resolution range 8.0 to 2.25 Ångstroms with I > 0.0 sigma(I).
Biological Assembly 1
Other Views
Asymmetric Unit
Crystal Packing
Enlarge Biological Assembly 1
Coordinate + Structure Data
Asymmetric Unit coordinates (pdb format, Unix compressed(.gz))
Asymmetric Unit coordinates (cif format, Unix compressed(.gz))
Biological Assembly coordinates (pdb format)
Structure Factors (cif format)
XML |
Complete with coordinates (xml format, GNU compressed(.gz))
XML |
Coordinates only (xml format, GNU compressed(.gz))
XML |
Header only (xml format, GNU compressed(.gz))
Derivative Data
Nucleic Acid Backbone Torsions
Base Pair Parameters
Base Pair Step Parameters
Hydrogen Bonding Classification
Links
The RCSB Protein Data Bank:
1F6J
PubMed:
10966645
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