NDB ID: UD0021


Title:STRUCTURAL CHARACTERISATION OF THE HOLLIDAY JUNCTION TCGGTACCGA
Molecular Description:5'-D(TpCpGpGpTpApCpCpGpA)-3'
Structural Features:DOUBLE HELIX, HOLLIDAY JUNCTION
Nucleic Acid Sequence:
ChainsA,B:(DT) (DC) (DG) (DG) (DT) (DA) (DC) (DC) (DG) (DA)
Primary Citation:Thorpe, J.H., Gale, B.C., Teixeira, S.C.M., Cardin, C.J.
Conformational and hydration effects of site-selective sodium, calcium and strontium ion binding to the DNA Holliday junction structure d(TCGGTACCGA)(4)
J.Mol.Biol. , 327, pp. 97 - 109, 2003.
Experimental Information:X-RAY DIFFRACTION
Space Group: 1
Cell Constants:
a = 64.302b = 25.034c = 36.778(Ångstroms)
= 90.00 = 110.04 = 90.00(degrees)
Refinement:The structure was refined using the REFMAC 5.1.19 program. The R value is 21.5 for 6621 reflections in the resolution range 34.503 to 1.652 Ångstroms .

Biological Assembly 1
Other Views
Asymmetric Unit
Crystal Packing
Enlarge Biological Assembly 1



Coordinate + Structure Data

Asymmetric Unit coordinates (pdb format, Unix compressed(.gz))

Asymmetric Unit coordinates (cif format, Unix compressed(.gz))

Biological Assembly coordinates (pdb format)

Structure Factors (cif format)

XML | Complete with coordinates (xml format, GNU compressed(.gz))
XML | Coordinates only (xml format, GNU compressed(.gz))
XML | Header only (xml format, GNU compressed(.gz))

Derivative Data

Nucleic Acid Backbone Torsions

Base Pair Parameters

Base Pair Step Parameters

Hydrogen Bonding Classification

Links

The RCSB Protein Data Bank: 1M6G

PubMed: 12614611




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