NDB ID: UD0024


Title:STRUCTURAL CHARACTERISATION OF THE HOLLIDAY JUNCTION FORMED BY THE SEQUENCE CCGGTACCGG AT 2.00 A
Molecular Description:5'-d(CpCpGpGpTpApCpCpGpG)-3'
Structural Features:B DOUBLE HELIX, Holiday junction,
Nucleic Acid Sequence:
ChainsA, B: (DC) (DC) (DG) (DG) (DT) (DA) (DC) (DC) (DG) (DG)
Primary Citation:Cardin, C.J., Gale, B.C., Thorpe, J.H., Texieira, S.C.M., Gan, Y., Moraes, M.I.A.A., Brogden, A.L.
Structural Analysis of two Holliday Junctions formed by the sequences TCGGTACCGA and CCGGTACCGG
To be Published
Experimental Information:X-RAY DIFFRACTION
Space Group: 1
Cell Constants:
a = 65.949b = 23.756c = 37.204(Ångstroms)
= 90.00 = 109.98 = 90.00(degrees)
Crystallization Conditions:
Method:VAPOR DIFFUSION, HANGING DROP
Refinement:The structure was refined using the REFMAC 5.1.24 program. The R value is 24.659 for 3539 reflections in the resolution range 34.92 to 2.00 Ångstroms with I > 1.0 sigma(I).

Biological Unit 1
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Coordinate + Structure Data

Asymmetric Unit coordinates (pdb format, Unix compressed(.gz))

Asymmetric Unit coordinates (cif format, Unix compressed(.gz))

Biological Unit coordinates (pdb format)

Structure Factors (cif format)

XML | Complete with coordinates (xml format, GNU compressed(.gz))
XML | Coordinates only (xml format, GNU compressed(.gz))
XML | Header only (xml format, GNU compressed(.gz))

Derivative Data

Nucleic Acid Backbone Torsions

Base Pair Parameters

Base Pair Step Parameters

Hydrogen Bonding Classification

Links

The Protein Data Bank: 1NT8




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