NDB ID: UD0062


Title:G4T3G4 DIMERIC QUADRUPLEX STRUCTURE
Molecular Description:5'-D(GpGpGpGpTpTpTpGpGpGpG)-3'
Structural Features:QUADRUPLE HELIX, loop, TETRAPLEX, base intercalated
Nucleic Acid Sequence:
ChainA:(DG) (DG) (DG) (DG) (DT) (DT) (DT) (DG) (DG) (DG) (DG)
Primary Citation:Hazel, P., Parkinson, G.N., Neidle, S.
Topology variation and loop structural homology in crystal and simulated structures of a bimolecular DNA quadruplex.
J.Am.Chem.Soc. , 128, pp. 5480 - 5487, 2006.
Experimental Information:X-RAY DIFFRACTION
Space Group: 2
Cell Constants:
a = 29.932b = 37.112c = 43.653(Ångstroms)
= 90.00 = 90.00 = 90.00(degrees)
Refinement:The structure was refined using the REFMAC 5.2.0005 program. The R value is 19.8 for 4065 reflections in the resolution range 23.3 to 1.500 Ångstroms with Fobs > 0.00 sigma(Fobs).

Biological Assembly 1
Other Views
Asymmetric Unit
Crystal Packing
Enlarge Biological Assembly 1



Coordinate + Structure Data

Asymmetric Unit coordinates (pdb format, Unix compressed(.gz))

Asymmetric Unit coordinates (cif format, Unix compressed(.gz))

Biological Assembly coordinates (pdb format)

Structure Factors (cif format)

XML | Complete with coordinates (xml format, GNU compressed(.gz))
XML | Coordinates only (xml format, GNU compressed(.gz))
XML | Header only (xml format, GNU compressed(.gz))

Derivative Data

Nucleic Acid Backbone Torsions

Base Pair Parameters

Base Pair Step Parameters

Hydrogen Bonding Classification

Links

The RCSB Protein Data Bank: 2AVH

PubMed: 16620121




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