NDB ID: UDF054


Title:INTERCALATED CYTOSINE MOTIF AND NOVEL ADENINE CLUSTERS IN THE CRYSTAL STRUCTURE OF TETRAHYMENA TELOMERE
Molecular Description:5'-D(ApApCpCpCpC)-3'
Structural Features:QUADRUPLE HELIX, PARALLEL-STRANDED, BASE INTERCALATED, FLIPPED-OUT BASE, ADENINE-CLUSTER, CONTINUOUS BASE STACKING
Nucleic Acid Sequence:
ChainsA,B,C,D,E,F,G,H:(DA) (DA) (DC) (DC) (DC) (DC)
Primary Citation:Cai, L., Chen, L., Raghavan, S., Ratliff, R., Moyzis, R., Rich, A.
Intercalated cytosine motif and novel adenine clusters in the crystal structure of the Tetrahymena telomere.
Nucleic Acids Res. , 26, pp. 4696 - 4705, 1998.
Experimental Information:X-RAY DIFFRACTION
Space Group: 21   21
Cell Constants:
a = 35.930b = 52.330c = 76.940(Ångstroms)
= 90.00 = 90.00 = 90.00(degrees)
Refinement:The structure was refined using the X-PLOR program. The R value is 21.2 for 4539 reflections in the resolution range 10.000 to 2.500 Ångstroms with Fobs > 2.000 sigma(Fobs).

Biological Assembly 1
Other Views
Asymmetric Unit
Crystal Packing

Biological Assemblies
Enlarge Biological Assembly 1
Enlarge Biological Assembly 2



Coordinate + Structure Data

Asymmetric Unit coordinates (pdb format, Unix compressed(.gz))

Asymmetric Unit coordinates (cif format, Unix compressed(.gz))

Biological Assembly coordinates (pdb format)12

XML | Complete with coordinates (xml format, GNU compressed(.gz))
XML | Coordinates only (xml format, GNU compressed(.gz))
XML | Header only (xml format, GNU compressed(.gz))

Derivative Data

Nucleic Acid Backbone Torsions

Base Pair Parameters

Base Pair Step Parameters

Hydrogen Bonding Classification

Links

The RCSB Protein Data Bank: 294D

PubMed: 9753739




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