NDB ID: UDIB70


Title:A ZIPPER-LIKE DNA DUPLEX D(GCGAAAGCT)
Molecular Description:5'-D(Gp(CBR)pGpApApApGpCpT)-3'
Structural Features:RH DOUBLE HELIX, OVERHANGING BASES
Nucleic Acid Sequence:
ChainA:(DG) (CBR) (DG) (DA) (DA) (DA) (DG) (DC) (DT)
Primary Citation:Shepard, W., Cruse, W.B., Fourme, R., de la Fortelle, E., Prange, T.
A zipper-like duplex in DNA: the crystal structure of d(GCGAAAGCT) at 2.1 A resolution.
Structure , 6, pp. 849 - 861, 1998.
Experimental Information:X-RAY DIFFRACTION
Space Group: 63   2
Cell Constants:
a = 37.560b = 37.560c = 65.390(Ångstroms)
= 90.00 = 90.00 = 120.00(degrees)
Refinement:The structure was refined using the X-PLOR program. The R value is 18.9 for 1832 reflections in the resolution range 15.000 to 2.100 Ångstroms .

Biological Assembly 1
Other Views
Asymmetric Unit
Crystal Packing
Enlarge Biological Assembly 1



Coordinate + Structure Data

Asymmetric Unit coordinates (pdb format, Unix compressed(.gz))

Asymmetric Unit coordinates (cif format, Unix compressed(.gz))

Biological Assembly coordinates (pdb format)

XML | Complete with coordinates (xml format, GNU compressed(.gz))
XML | Coordinates only (xml format, GNU compressed(.gz))
XML | Header only (xml format, GNU compressed(.gz))

Derivative Data

Nucleic Acid Backbone Torsions

Base Pair Parameters

Base Pair Step Parameters

Hydrogen Bonding Classification

Links

The RCSB Protein Data Bank: 376D

PubMed: 9687367




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