NDB ID: UDJ060


Title:A DNA DECAMER WITH A STICKY END: THE CRYSTAL STRUCTURE OF D-CGACGATCGT
Molecular Description:5'-D(CpGpApCpGpApTpCpGpT)-3'
Structural Features:B DOUBLE HELIX, OVERHANGING BASE, CONTINUOUS HELIX
Nucleic Acid Sequence:
ChainsA,B:(DC) (DG) (DA) (DC) (DG) (DA) (DT) (DC) (DG) (DT)
Primary Citation:Qiu, H., Dewan, J.C., Seeman, N.C.
A DNA decamer with a sticky end: the crystal structure of d-CGACGATCGT.
J.Mol.Biol. , 267, pp. 881 - 898, 1997.
Experimental Information:X-RAY DIFFRACTION
Space Group: 21   1
Cell Constants:
a = 26.450b = 34.660c = 32.170(Ångstroms)
= 90.00 = 113.40 = 90.00(degrees)
Refinement:The structure was refined using the NUCLSQ program. The R value is 21.4 for 1421 reflections in the resolution range 8.000 to 2.600 Ångstroms with Fobs > 2.000 sigma(Fobs).

Biological Assembly 1
Other Views
Asymmetric Unit
Crystal Packing
Enlarge Biological Assembly 1



Coordinate + Structure Data

Asymmetric Unit coordinates (pdb format, Unix compressed(.gz))

Asymmetric Unit coordinates (cif format, Unix compressed(.gz))

Biological Assembly coordinates (pdb format)

XML | Complete with coordinates (xml format, GNU compressed(.gz))
XML | Coordinates only (xml format, GNU compressed(.gz))
XML | Header only (xml format, GNU compressed(.gz))

Derivative Data

Nucleic Acid Backbone Torsions

Base Pair Parameters

Base Pair Step Parameters

Hydrogen Bonding Classification

Links

The RCSB Protein Data Bank: 309D

PubMed: 9135119




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