NDB ID: UDJ061
Title:
THE CRYSTAL STRUCTURE OF THE DNA DECAMER D(GGCAATTGCG) CONTAINS BOTH MAJOR AND MINOR GROOVE BINDING G.(G.C) TRIPLETS
Molecular Description:
5'-D(GpGpCpApApTpTpGpCpG)-3'
Structural Features:
B DOUBLE HELIX, FLIPPED-OUT BASE
Nucleic Acid Sequence:
Chain
A:
(DG) (DG) (DC) (DA) (DA) (DT) (DT) (DG) (DC) (DG)
Primary Citation:
Nunn, C.M., Neidle, S.
Structure of the DNA decamer d(GGCAATTGCG) contains both major- and minor-groove binding G.(G.C) base triplets.
Acta Crystallogr.,Sect.D
,
54
, pp. 577 - 583, 1998.
Experimental Information:
X-RAY DIFFRACTION
Space Group:
I
2
1
2
1
2
1
Cell Constants:
a = 27.920
b = 39.210
c = 54.040
(Ångstroms)
= 90.00
= 90.00
= 90.00
(degrees)
Refinement:
The structure was refined using the X-PLOR program. The R value is 20.3 for 1177 reflections in the resolution range 8.000 to 2.400 Ångstroms with Fobs > 2.000 sigma(Fobs).
Biological Assembly 1
Other Views
Asymmetric Unit
Crystal Packing
Enlarge Biological Assembly 1
Coordinate + Structure Data
Asymmetric Unit coordinates (pdb format, Unix compressed(.gz))
Asymmetric Unit coordinates (cif format, Unix compressed(.gz))
Biological Assembly coordinates (pdb format)
Structure Factors (cif format)
XML |
Complete with coordinates (xml format, GNU compressed(.gz))
XML |
Coordinates only (xml format, GNU compressed(.gz))
XML |
Header only (xml format, GNU compressed(.gz))
Derivative Data
Nucleic Acid Backbone Torsions
Base Pair Parameters
Base Pair Step Parameters
Hydrogen Bonding Classification
Links
The RCSB Protein Data Bank:
335D
PubMed:
9761852
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