NDB ID: UDJ061


Title:THE CRYSTAL STRUCTURE OF THE DNA DECAMER D(GGCAATTGCG) CONTAINS BOTH MAJOR AND MINOR GROOVE BINDING G.(G.C) TRIPLETS
Molecular Description:5'-D(GpGpCpApApTpTpGpCpG)-3'
Structural Features:B DOUBLE HELIX, FLIPPED-OUT BASE
Nucleic Acid Sequence:
ChainA:(DG) (DG) (DC) (DA) (DA) (DT) (DT) (DG) (DC) (DG)
Primary Citation:Nunn, C.M., Neidle, S.
Structure of the DNA decamer d(GGCAATTGCG) contains both major- and minor-groove binding G.(G.C) base triplets.
Acta Crystallogr.,Sect.D , 54, pp. 577 - 583, 1998.
Experimental Information:X-RAY DIFFRACTION
Space Group: 21   21   21
Cell Constants:
a = 27.920b = 39.210c = 54.040(Ångstroms)
= 90.00 = 90.00 = 90.00(degrees)
Refinement:The structure was refined using the X-PLOR program. The R value is 20.3 for 1177 reflections in the resolution range 8.000 to 2.400 Ångstroms with Fobs > 2.000 sigma(Fobs).

Biological Assembly 1
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Asymmetric Unit
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Coordinate + Structure Data

Asymmetric Unit coordinates (pdb format, Unix compressed(.gz))

Asymmetric Unit coordinates (cif format, Unix compressed(.gz))

Biological Assembly coordinates (pdb format)

Structure Factors (cif format)

XML | Complete with coordinates (xml format, GNU compressed(.gz))
XML | Coordinates only (xml format, GNU compressed(.gz))
XML | Header only (xml format, GNU compressed(.gz))

Derivative Data

Nucleic Acid Backbone Torsions

Base Pair Parameters

Base Pair Step Parameters

Hydrogen Bonding Classification

Links

The RCSB Protein Data Bank: 335D

PubMed: 9761852




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