NDB ID: UHJ055
Title:
THE STRUCTURE OF AN RNA/DNA HYBRID: A SUBSTRATE OF THE RIBONUCLEASE ACTIVITY OF HIV-1 REVERSE TRANSCRIPTASE
Molecular Description:
5'-R(UpUpCpGpGpGpCpGpCpC)-3'/5'-D(GpGpCp
GpCpCpCpGpApA)-3'
Structural Features:
RH DOUBLE HELIX
Nucleic Acid Sequence:
Chain
A:
U U C G G G C G C C
Chain
B:
(DG) (DG) (DC) (DG) (DC) (DC) (DC) (DG) (DA) (DA)
Primary Citation:
Horton, N.C., Finzel, B.C.
The structure of an RNA/DNA hybrid: a substrate of the ribonuclease activity of HIV-1 reverse transcriptase.
J.Mol.Biol.
,
264
, pp. 521 - 533, 1996.
Experimental Information:
X-RAY DIFFRACTION
Space Group:
P
4
3
2
2
Cell Constants:
a = 31.300
b = 31.300
c = 137.700
(Ångstroms)
= 90.00
= 90.00
= 90.00
(degrees)
Refinement:
The structure was refined using the X-PLOR program. The R value is 14.5 for 2457 reflections in the resolution range 5.000 to 2.300 Ångstroms with Fobs > 2.000 sigma(Fobs).
Biological Assembly 1
Other Views
Asymmetric Unit
Crystal Packing
RNA View
RNAML File
Enlarge Biological Assembly 1
Coordinate + Structure Data
Asymmetric Unit coordinates (pdb format, Unix compressed(.gz))
Asymmetric Unit coordinates (cif format, Unix compressed(.gz))
Biological Assembly coordinates (pdb format)
Structure Factors (cif format)
XML |
Complete with coordinates (xml format, GNU compressed(.gz))
XML |
Coordinates only (xml format, GNU compressed(.gz))
XML |
Header only (xml format, GNU compressed(.gz))
Derivative Data
Nucleic Acid Backbone Torsions
Base Pair Parameters
Base Pair Step Parameters
Hydrogen Bonding Classification
Links
The RCSB Protein Data Bank:
1FIX
PubMed:
8969302
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