NDB ID: UR0001


Title:CRYSTAL STRUCTURE OF A LEADZYME; METAL BINDING AND IMPLICATIONS FOR CATALYSIS
Molecular Description:5'-R(CpGpGpApCpCpGpApGpCpCpApG)-3'
5'-R(GpCpUpGpGpGpApGp UpCpC)-3'
Structural Features:DOUBLE HELIX, FLIPPED-OUT BASES, OVERHANGING BASES
Nucleic Acid Sequence:
ChainsA,C:C G G A C C G A G C C A G
ChainsB,D:G C U G G G A G U C C
Primary Citation:Wedekind, J.E., McKay, D.B.
Crystal structure of a lead-dependent ribozyme revealing metal binding sites relevant to catalysis.
Nat.Struct.Biol. , 6, pp. 261 - 268, 1999.
Experimental Information:X-RAY DIFFRACTION
Space Group: 61   2
Cell Constants:
a = 60.400b = 60.400c = 133.100(Ångstroms)
= 90.00 = 90.00 = 120.00(degrees)
Refinement:The structure was refined using the CNS program. The R value is 25.5 for 4169 reflections in the resolution range 25.0 to 2.70 Ångstroms .

Biological Assembly 1
Other Views
Asymmetric Unit
Crystal Packing
RNA View
RNAML File

Biological Assemblies
Enlarge Biological Assembly 1
Enlarge Biological Assembly 2



Coordinate + Structure Data

Asymmetric Unit coordinates (pdb format, Unix compressed(.gz))

Asymmetric Unit coordinates (cif format, Unix compressed(.gz))

Biological Assembly coordinates (pdb format)12

Structure Factors (cif format)

XML | Complete with coordinates (xml format, GNU compressed(.gz))
XML | Coordinates only (xml format, GNU compressed(.gz))
XML | Header only (xml format, GNU compressed(.gz))

Derivative Data

Nucleic Acid Backbone Torsions

Base Pair Parameters

Base Pair Step Parameters

Hydrogen Bonding Classification

Links

The RCSB Protein Data Bank: 429D

PubMed: 10074945




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