NDB ID: UR0011


Title:CRYSTAL STRUCTURE OF THE MALACHITE GREEN APTAMER COMPLEXED WITH TETRAMETHYL-ROSAMINE
Molecular Description:MALACHITE GREEN RNA APTAMER
TETRAMETHYL-ROSAMINE
Structural Features:SINGLE STRAND
Nucleic Acid Sequence:
ChainA:G G A (5BU) C C C G A C (5BU) G G C G A G A G C C A G G (5BU) A A C G A A (5BU) G G A (5BU) C C
Primary Citation:Baugh, C., Grate, D., Wilson, C.
2.8 A crystal structure of the malachite green aptamer.
J.Mol.Biol. , 301, pp. 117 - 128, 2000.
Experimental Information:X-RAY DIFFRACTION
Space Group: 65   2
Cell Constants:
a = 55.297b = 55.297c = 143.92(Ångstroms)
= 90. = 90. = 120.(degrees)
Refinement:The structure was refined using the CNS 0.9 program. The R value is 26.1 for 3188 reflections in the resolution range 9.0 to 2.8 Ångstroms with Fobs > 0. sigma(Fobs).

Biological Assembly 1
Other Views
Asymmetric Unit
Crystal Packing
RNA View
RNAML File
Enlarge Biological Assembly 1



Coordinate + Structure Data

Asymmetric Unit coordinates (pdb format, Unix compressed(.gz))

Asymmetric Unit coordinates (cif format, Unix compressed(.gz))

Biological Assembly coordinates (pdb format)

Structure Factors (cif format)

XML | Complete with coordinates (xml format, GNU compressed(.gz))
XML | Coordinates only (xml format, GNU compressed(.gz))
XML | Header only (xml format, GNU compressed(.gz))

Derivative Data

Nucleic Acid Backbone Torsions

Base Pair Parameters

Base Pair Step Parameters

Hydrogen Bonding Classification

Links

The RCSB Protein Data Bank: 1F1T

PubMed: 10926496




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