NDB ID: UR0012View UR0012 NDB Atlas Page


Base Pair Step Parameters

step_numberstep_nameshiftsliderisetiltrolltwistx_displacementy_displacementhelical_riseinclinationtiphelical_twist
1AA_U106U107:A214G215_AA-1.309-2.0973.833-1.5375.45016.017-10.9343.3513.06618.8115.30416.982
2AA_U107G108:C213A214_AA-0.005-1.4183.2743.0259.57835.112-3.5210.4052.79515.489-4.89136.477
3AA_G108C109:G212C213_AA1.214-1.5673.0306.5170.86035.041-2.680-1.0803.1601.412-10.70635.633
4AA_C109G110:C211G212_AA-0.428-1.7233.770-0.67117.27631.416-5.3710.5982.52129.2941.13735.754
5AA_G110G111:A210C211_AA-1.036-1.1092.842-0.3573.01430.184-2.6371.9192.7335.7700.68330.333
6AA_G111G112:C208A210_AA1.205-1.6063.274-3.6666.19424.943-5.146-3.6112.60513.9748.27125.945
7AA_G112A113:A207C208_AA-0.630-0.6253.3174.2992.73467.888-0.6620.7263.2522.445-3.84468.056
8AA_A113A114:A206A207_AA0.415-0.8574.1424.2351.077-8.8282.38712.6603.629-6.49825.555-9.848
9AA_A114G116:U205A206_AA-0.921-1.3235.1265.30231.11460.023-3.0201.1444.01629.049-4.95067.125
10AA_G116G117:C204U205_AA-0.233-1.2433.0822.2819.33235.253-3.1380.6552.65815.065-3.68236.499
11AA_G117G118:C203C204_AA0.735-1.6703.293-2.07714.73629.386-5.186-1.6142.17426.9773.80332.865
12AA_G118G119:U202C203_AA0.191-2.0983.157-0.44214.64927.273-6.243-0.4281.81628.5970.86230.896
13AA_G119U120:G201U202_AA0.059-1.0703.117-0.9193.74949.333-1.540-0.1343.0324.4831.09949.475
14AA_U120C121:G200G201_AA-0.539-2.0803.2314.6358.00828.091-5.5921.9322.43915.959-9.23729.546
15AA_C121A123:A198G200_AA2.6131.6142.45511.154-158.72334.8741.501-1.278-0.612-86.625-6.088160.084
16AA_G126C127:G195A196_AA1.291-1.6673.0170.4503.24438.101-2.914-1.9192.8854.958-0.68838.236
17AA_C127C128:G194G195_AA-0.015-1.6473.833-8.3327.74234.324-3.885-1.2973.31112.69513.66136.105
18AA_C128G129:C193G194_AA-0.450-1.4702.9352.3712.07629.754-3.2251.3012.7854.029-4.60129.916
19AA_G129U131:A192C193_AA-1.595-0.9253.1741.74216.74751.893-1.9571.8442.72718.588-1.93354.375
20AA_U131C132:G191A192_AA-0.199-1.9643.1323.327-0.21932.604-3.4450.9003.109-0.388-5.90732.770
21AA_C132A133:U190G191_AA-0.510-1.7423.255-4.25610.64227.712-5.3790.1852.48121.1118.44229.945
22AA_A133G134:C189U190_AA-0.180-1.4263.402-1.8478.53632.989-3.7740.0172.95714.7143.18334.095
23AA_G134U135:A187C189_AA-0.610-2.8692.954-5.9382.30259.542-2.9790.3472.8952.3115.96159.850
24AA_U135A136:U182A187_AA-0.2930.5653.4222.03110.4723.873-14.7434.8961.63868.820-13.35111.346
25AA_A136C137:G181U182_AA1.047-1.4702.8691.4415.39336.217-2.969-1.4972.6688.612-2.30036.631
26AA_C137C138:G180G181_AA-1.129-1.7743.161-2.10015.06527.852-5.6111.7402.03528.7434.00731.663
27AA_A139A140:G163G164_AA-0.600-0.7292.973-7.6967.44134.562-2.129-0.0182.82612.16812.58536.133
28AA_A140G141:U162G163_AA-0.025-1.0733.503-8.9125.94853.733-1.545-0.5383.3406.5089.75154.712
29AA_G141U142:A161U162_AA-0.114-1.2583.347-1.3165.23043.221-2.2010.0273.1837.0661.77943.540
30AA_U142C143:G160A161_AA-0.341-1.4423.198-1.7284.10930.670-3.4530.3212.9987.7173.24530.984
31AA_C143U144:A159G160_AA-0.295-1.2663.284-1.2228.85833.543-3.4260.3152.87615.0192.07334.681
32AA_U144C145:G158A159_AA0.280-1.1633.215-0.8005.91732.408-3.010-0.6232.95510.4901.41932.939
33AA_C145A146:U157G158_AA-0.034-1.4603.0951.33511.17229.559-4.4830.2772.39520.965-2.50631.584
34AA_A146G147:U156U157_AA0.076-1.5562.952-3.52915.47727.773-5.037-0.6421.82929.4006.70331.912
35AA_G147G148:U155U156_AA0.525-1.7263.182-3.1626.65233.287-3.915-1.3562.73611.4385.43634.070
36AA_G148G149:C154U155_AA-0.122-1.8573.242-0.1142.53436.804-3.2680.1783.1124.0070.18036.888
37AA_C165C166:G174G175_AA-0.297-1.2082.9731.06110.91234.188-3.2990.6122.47417.997-1.74935.853
38AA_C166U167:A173G174_AA2.841-1.440-1.107-70.610-157.616-65.8130.2651.627-0.73080.326-35.985-173.881
39AA_U167A171:A172A173_AA0.7490.409-3.6525.7474.98842.4561.094-1.639-3.4596.822-7.86043.102
40AB_A171G254:C170A172_AA-0.3493.8390.814-153.06287.186-101.943-1.925-0.184-0.754-43.805-76.904-177.577
41BB_G254C255:G169C170_AA0.592-2.1663.385-0.6174.34237.176-3.944-1.0043.1116.7820.96437.424
42AA_G220U221:A252U253_AA-0.165-1.1233.104-4.2245.66038.625-2.299-0.2222.9188.4716.32239.241
43AA_U221C222:G251A252_AA0.594-1.2193.1190.7401.56435.780-2.195-0.8663.0762.544-1.20435.821
44AA_C222C223:G250G251_AA-0.791-1.9793.497-1.5156.97132.409-4.6531.1273.05012.3042.67433.164
45AA_C223A248:A151G250_AA-4.205-5.6392.263-149.016-29.248111.632-2.6411.0804.757-15.07876.821164.298
46AA_A248A226:U249A151_AA3.5333.2221.266-150.30250.47796.5241.582-1.904-0.58026.09277.692165.768
47AA_A226G227:U247U249_AA4.914-0.2722.292-4.66035.48159.783-1.094-4.4601.59332.6564.28968.815
48AA_G227U228:A246U247_AA0.055-1.1283.214-0.9339.51740.327-2.557-0.1722.88513.5741.33141.400
49AA_U228C229:G245A246_AA-0.363-1.1543.0710.1306.68530.653-3.2710.6932.76212.460-0.24231.356
50AA_C229A230:U244G245_AA0.068-1.4643.120-1.14411.72830.345-4.411-0.2962.39921.4162.08932.503
51AA_A230A231:U243U244_AA-0.352-1.2333.3302.7699.38332.893-3.5141.0172.84316.131-4.76034.279
52AA_A231C232:G242U243_AA0.797-1.2963.233-1.0076.91732.820-3.319-1.5382.88212.0711.75733.536
53AA_C232A233:U241G242_AA-0.012-1.6712.9882.9478.61031.442-4.2300.4532.44715.486-5.30032.701
54AA_A233G234:C240U241_AA-0.424-1.3953.4923.3227.98537.404-3.1421.0693.09312.251-5.09738.356
55AA_G234A235:U239C240_AA-0.253-1.4073.141-2.5544.22326.275-4.065-0.0712.8949.1875.55626.726
56BB_C165C166:G174G175_BB-0.292-1.2723.0812.30414.27633.417-3.7650.7472.33823.506-3.79336.329
57BB_C166U167:A173G174_BB2.807-0.912-1.029-71.404-160.422-144.8970.3211.464-0.88880.305-35.743-178.672
58BB_U167A171:A172A173_BB0.5350.177-3.76511.4953.84739.9290.708-2.124-3.4585.482-16.38141.656
59BA_A171G254:C170A172_BB-3.503-1.5190.187157.860-82.422-143.1340.802-1.6710.93641.23478.974-179.394
60AA_G254C255:G169C170_BB1.192-1.8213.3444.854-3.59240.124-2.199-1.1423.601-5.200-7.02640.558
61BB_G200G201:U120C121_BB0.346-2.2412.854-9.4273.03727.703-4.954-2.3442.3586.10218.93729.387
62BB_G201U202:G119U120_BB-0.368-1.0123.2422.8885.41446.390-1.7120.6973.0856.837-3.64846.771
63BB_U202C203:G118G119_BB-0.760-2.0393.137-1.28912.92831.804-5.1801.1182.19522.4552.23934.292
64BB_C203C204:G117G118_BB-0.338-1.8163.223-2.17410.45131.395-4.7780.2632.52318.6513.88033.117
65BB_C204U205:G116G117_BB-0.368-1.5133.3901.1579.80938.016-3.4010.6842.91414.756-1.74039.233
66BB_U205A206:A114G116_BB0.710-1.4165.126-4.04925.24761.889-2.806-0.8904.28623.5113.77166.476
67BB_A206A207:A113A114_BB0.155-0.6743.286-1.4390.815-11.7902.159-1.1803.319-3.944-6.962-11.905
68BB_A207C208:G112A113_BB1.487-0.7683.476-0.0466.90959.705-1.126-1.4883.3766.9150.04760.067
69BB_C208A210:G111G112_BB-0.903-1.5333.4385.48712.09033.431-4.1372.2142.57220.061-9.10535.901
70BB_A210C211:G110G111_BB1.294-0.7303.164-3.9796.96628.574-2.771-3.2972.71313.7747.86729.656
71BB_C211G212:C109G110_BB0.983-2.2183.1650.7873.68927.934-5.356-1.8472.8807.599-1.62128.182
72BB_G212C213:G108C109_BB-0.802-2.0293.026-0.3151.33431.746-3.9301.4112.9492.4360.57531.775
73BB_C213A214:U107G108_BB0.478-1.9163.3501.2606.77828.726-5.145-0.6802.85013.419-2.49429.525
74BB_A214G215:A105U107_BB0.084-3.3672.982-9.4192.63644.864-4.522-0.8282.7203.40712.17145.864
75BB_G215C216:A104A105_BB0.964-2.1913.223-1.439-0.02527.048-4.672-2.4153.170-0.0543.07427.086
76BB_C216C217:G103A104_BB0.990-1.8403.8294.3326.75332.915-4.395-0.9073.49211.703-7.50833.852
77BB_C217A219:A218G103_BB-1.064-2.0083.7432.2373.32445.362-2.9211.5953.5424.301-2.89445.530
78BB_A219G220:U253A218_BB1.2480.8023.454-2.3455.39059.8980.519-1.3673.4615.3842.34260.160
79BB_G220U221:A252U253_BB-0.208-1.3083.038-1.3542.77638.995-2.2590.1622.9464.1512.02539.112
80BB_U221C222:G251A252_BB0.323-1.1313.1163.2903.12437.782-2.109-0.1013.0334.804-5.05838.044
81BB_C222C223:G250G251_BB-0.750-2.0163.457-3.8429.97828.814-5.7160.6832.70019.2347.40730.694
82BB_C223A248:A151G250_BB-4.238-5.6952.384-150.411-29.632107.072-2.6420.9605.006-15.30877.702164.226
83BB_A248A226:U249A151_BB3.6113.0961.015-147.23252.775106.6641.535-1.888-0.56727.15975.769165.974
84BB_A226G227:U247U249_BB4.863-0.4022.182-2.52737.87459.586-1.210-4.3121.54034.6132.30969.700
85BB_G227U228:A246U247_BB0.014-1.3143.2010.3489.32538.546-2.9580.0182.82013.879-0.51739.618
86BB_U228C229:G245A246_BB-0.082-1.2303.1010.6847.58932.598-3.2720.2452.75013.294-1.19833.453
87BB_C229A230:U244G245_BB0.151-1.4343.244-0.04711.84828.088-4.882-0.2972.45223.1510.09230.438
88BB_A230A231:U243U244_BB-0.597-1.2933.081-0.2186.25633.631-3.0960.9852.80610.6970.37234.192
89BB_A231C232:G242U243_BB1.012-1.3173.2393.8425.40334.492-2.973-1.1163.0959.009-6.40635.104
90BB_C232A233:U241G242_BB-0.127-1.7693.2500.94212.81529.245-5.2850.3832.28723.976-1.76231.887
91BB_A233G234:C240U241_BB-0.562-1.4713.2993.4548.70536.411-3.3651.3012.82313.655-5.41937.557
92BB_G234A235:U239C240_BB-0.081-1.6293.4690.5820.35934.521-2.8030.2313.4500.605-0.98034.528
93BB_G126C127:G195A196_BB1.314-1.7903.145-2.6044.67737.745-3.284-2.3152.8177.1864.00038.109
94BB_C127C128:G194G195_BB-0.334-1.7293.698-1.3429.42233.018-4.4980.3433.11316.1642.30234.325
95BB_C128G129:C193G194_BB-0.381-1.3863.192-0.99117.43831.769-4.3940.4912.17529.2561.66336.145
96BB_G129U131:A192C193_BB-1.796-0.6102.9521.8403.91748.382-1.0082.3092.8324.768-2.24048.564
97BB_U131C132:G191A192_BB-0.093-1.7563.421-0.6996.15732.463-4.1280.0463.04710.8901.23633.034
98BB_C132A133:U190G191_BB-0.487-1.6592.8971.19916.16326.618-5.4111.0811.62331.651-2.34931.088
99BB_A133G134:C189U190_BB-0.120-1.4933.582-2.0762.65631.786-3.230-0.1863.4504.8333.77831.959
100BB_G134U135:A187C189_BB-0.833-3.0673.076-7.9442.57158.126-3.2550.4633.0302.6318.13158.671
101BB_U135A136:U182A187_BB-0.3520.3773.3817.0718.9732.666-11.03911.8760.84560.404-47.60211.731
102BB_A136C137:G181U182_BB1.036-1.1852.868-1.7866.64735.626-2.683-1.8742.56010.7412.88636.263
103BB_C137C138:G180G181_BB-1.031-1.6253.366-3.16017.74029.384-5.2921.2922.16231.5165.61534.365
104BB_A139A140:G163G164_BB-0.709-0.7322.927-7.9276.59534.450-2.0350.1302.83310.83713.02635.916
105BB_A140G141:U162G163_BB0.167-1.1433.644-8.6376.10853.203-1.665-0.7633.4396.7459.53754.169
106BB_G141U142:A161U162_BB-0.181-1.3883.362-1.6745.59244.667-2.3180.0853.1797.3212.19145.028
107BB_U142C143:G160A161_BB-0.147-1.3983.332-4.3815.01132.863-3.241-0.4603.0858.7457.64733.512
108BB_C143U144:A159G160_BB-0.248-1.2882.9812.2097.92530.567-3.6250.8072.55114.700-4.09831.629
109BB_U144C145:G158A159_BB0.419-0.8853.1971.5695.22731.643-2.501-0.4873.0329.497-2.85132.098
110BB_C145A146:U157G158_BB-0.190-1.3313.187-1.48715.25432.729-4.0810.1192.36225.4072.47736.050
111BB_A146G147:U156U157_BB0.026-1.8643.025-1.71312.20925.279-6.138-0.3751.93026.0153.65028.081
112BB_G147G148:U155U156_BB0.506-1.7483.383-3.13810.98433.208-4.461-1.2852.63318.5495.29935.065
113BB_G148G149:C154U155_BB-0.077-1.7953.141-2.9302.92137.712-3.113-0.2342.9964.5034.51637.930