NDB ID: UR0021


Title:LOW RESOLUTION CRYSTAL STRUCTURE OF A VIRAL RNA PSEUDOKNOT
Molecular Description:RNA Pseudoknot
Structural Features:SINGLE STRAND, LOOPS, FLIPPED-OUT BASES
Nucleic Acid Sequence:
ChainA: (GTP) G C G C G G C A C C G U C C G C G G A A C A A A C G G
Primary Citation:Egli, M., Minasov, G., Su, L., Rich, A.
Metal ions and flexibility in a viral RNA pseudoknot at atomic resolution.
Proc.Natl.Acad.Sci.USA , 99, pp. 4302 - 4307, 2002.
Experimental Information:X-RAY DIFFRACTION
Space Group: 21   3
Cell Constants:
a = 107.810b = 107.810c = 107.810(Ångstroms)
= 90.00 = 90.00 = 90.00(degrees)
Crystallization Conditions:
Method:VAPOR DIFFUSION, SITTING DROP
Drop:(NH4)2SO4, sodium citrate
Refinement:The structure was refined using the CNS program. The R value is 27.1 for 4989 reflections in the resolution range 20.0 to 2.85 Ångstroms with Fobs > 0.0 sigma(Fobs).

Biological Unit 1
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Coordinate + Structure Data

Asymmetric Unit coordinates (pdb format, Unix compressed(.gz))

Asymmetric Unit coordinates (cif format, Unix compressed(.gz))

Biological Unit coordinates (pdb format)

Structure Factors (cif format)

XML | Complete with coordinates (xml format, GNU compressed(.gz))
XML | Coordinates only (xml format, GNU compressed(.gz))
XML | Header only (xml format, GNU compressed(.gz))

Derivative Data

Nucleic Acid Backbone Torsions

Base Pair Parameters

Base Pair Step Parameters

Hydrogen Bonding Classification

Links

The Protein Data Bank: 1L3D

PubMed: 11904368




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