NDB ID: UR0029


Title:CROSSLINKED HAMMERHEAD RIBOZYME INITIAL STATE
Molecular Description:Hammerhead Ribozyme
Structural Features:DOUBLE HELIX, bulge, flipped-out bases, overhanging bases
Nucleic Acid Sequence:
ChainA:G U G G U C U G A U G A G G C C
ChainB:G C C G A A A C U C G U A A G A G U C A C C A C
Primary Citation:Dunham, C.M., Murray, J.B., Scott, W.G.
A helical twist-induced conformational switch activates cleavage in the hammerhead ribozyme.
J.Mol.Biol. , 332, pp. 327 - 336, 2003.
Experimental Information:X-RAY DIFFRACTION
Space Group: 31   1
Cell Constants:
a = 65.639b = 65.639c = 137.475(Ångstroms)
= 90.00 = 90.00 = 120.00(degrees)
Refinement:The structure was refined using the REFMAC 5.1 program. The R value is 20.3 for 7544 reflections in the resolution range 19.76 to 2.85 Ångstroms with Fobs > 0.0 sigma(Fobs).

Biological Assembly 1
Other Views
Asymmetric Unit
Crystal Packing
RNA View
RNAML File
Enlarge Biological Assembly 1



Coordinate + Structure Data

Asymmetric Unit coordinates (pdb format, Unix compressed(.gz))

Asymmetric Unit coordinates (cif format, Unix compressed(.gz))

Biological Assembly coordinates (pdb format)

XML | Complete with coordinates (xml format, GNU compressed(.gz))
XML | Coordinates only (xml format, GNU compressed(.gz))
XML | Header only (xml format, GNU compressed(.gz))

Derivative Data

Nucleic Acid Backbone Torsions

Base Pair Parameters

Base Pair Step Parameters

Hydrogen Bonding Classification

Links

The RCSB Protein Data Bank: 1NYI

PubMed: 12948485




ndbadmin@ndbserver.rutgers.edu
©1995-2013 The Nucleic Acid Database Project
Rutgers, The State University of New Jersey