NDB ID: UR0035


Title:CRYSTAL STRUCTURE OF THE SARCIN/RICIN DOMAIN FROM E.COLI 23S RRNA AT 1.04 RESOLUTION
Molecular Description:sarcin/ricin 23S rRNA
Structural Features:SINGLE STRAND, LOOP, HAIRPIN LOOP, FLIPPED-OUT BASES
Nucleic Acid Sequence:
ChainA: U G C U C C U A G U A C G A G A G G A C C G G A G U G
Primary Citation:Correll, C.C., Beneken, J., Plantinga, M.J., Lubbers, M., Chan, Y.L.
The common and distinctive features of the bulged-G motif based on a 1.04 A resolution RNA structure
Nucleic Acids Res. , 31, pp. 6806 - 6818, 2003.
Experimental Information:X-RAY DIFFRACTION
Space Group: 43
Cell Constants:
a = 29.529b = 29.529c = 76.574(Ångstroms)
= 90.00 = 90.00 = 90.00(degrees)
Crystallization Conditions:
Method:VAPOR DIFFUSION, HANGING DROP
Drop:ammonium sulfate, K-MOPS, magnesium chloride, manganese chloride, H2O
Reservoir:ammonium sulfate, K-MOPS, magnesium chloride, manganese chloride, H2O
Refinement:The structure was refined using the SHELXL-97 program. The R value is 13.61 for 29814 reflections in the resolution range 40 to 1.04 Ångstroms with I > 0.0 sigma(I).

Biological Unit 1
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Coordinate + Structure Data

Asymmetric Unit coordinates (pdb format, Unix compressed(.gz))

Asymmetric Unit coordinates (cif format, Unix compressed(.gz))

Biological Unit coordinates (pdb format)

Structure Factors (cif format)

XML | Complete with coordinates (xml format, GNU compressed(.gz))
XML | Coordinates only (xml format, GNU compressed(.gz))
XML | Header only (xml format, GNU compressed(.gz))

Derivative Data

Nucleic Acid Backbone Torsions

Base Pair Parameters

Base Pair Step Parameters

Hydrogen Bonding Classification

Links

The Protein Data Bank: 1Q9A

PubMed: 14627814




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