NDB ID: UR0041


Title:STRUCTURE OF THE TETRAHYMENA RIBOZYME: BASE TRIPLE SANDWICH AND METAL ION AT THE ACTIVE SITE
Molecular Description:Tetrahymena ribozyme RNA
Structural Features:SINGLE STRAND, HAIRPIN LOOP, LOOPS
Nucleic Acid Sequence:
ChainsA,B,C,D:G A C C G U C A A A U U G C G G G A A A G G G G U C A A C A G C C G U U C A G U A C C A A G U C U C A G G G G A A A C U U U G A G A U G G C C U U G C A A A G G G U A U G G U A A U A A G C U G A C G G A C A U G G U C C U A A C C G C G C A G C C A A G U C C U A A G U C A A C A G G A G A C U G U U G A U A U G G A U G C A G U A C A C A G A C U A G A U G U C G G C C G G G G A A G A U G U A U U C U U C U C A U A A G G U A U A G U C G G A C C U C U C C C G A A A G G G A G U U G G A G U A C U C G
Primary Citation:Guo, F., Gooding, A.R., Cech, T.R.
Structure of the Tetrahymena ribozyme: base triple sandwich and metal ion at the active site.
Mol.Cell , 16, pp. 351 - 362, 2004.
Experimental Information:X-RAY DIFFRACTION
Space Group: 41   21   2
Cell Constants:
a = 175.400b = 175.400c = 304.800(Ångstroms)
= 90.00 = 90.00 = 90.00(degrees)
Refinement:The structure was refined using the CNS program. The R value is 26.3 for 43972 reflections in the resolution range 20. to 3.8 Ångstroms with Fobs > 0. sigma(Fobs).

Biological Assembly 1
Other Views
Asymmetric Unit
Crystal Packing
RNA View
RNAML File

Biological Assemblies
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Enlarge Biological Assembly 3
Enlarge Biological Assembly 4



Coordinate + Structure Data

Asymmetric Unit coordinates (pdb format, Unix compressed(.gz))

Asymmetric Unit coordinates (cif format, Unix compressed(.gz))

Biological Assembly coordinates (pdb format)1234

Structure Factors (cif format)

XML | Complete with coordinates (xml format, GNU compressed(.gz))
XML | Coordinates only (xml format, GNU compressed(.gz))
XML | Header only (xml format, GNU compressed(.gz))

Derivative Data

Nucleic Acid Backbone Torsions

Base Pair Parameters

Base Pair Step Parameters

Hydrogen Bonding Classification

Links

The RCSB Protein Data Bank: 1X8W

PubMed: 15525509




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