|
| NDB ID: UR0048 | View UR0048 NDB Atlas Page |
|
Base Pair Step Parameters
|
| step_number | step_name | shift | slide | rise | tilt | roll | twist | x_displacement | y_displacement | helical_rise | inclination | tip | helical_twist |
| 1 | AA_G9A10:U3U4_BB | 1.143 | -1.099 | 3.747 | -14.550 | 19.234 | 42.914 | -2.843 | -2.526 | 2.574 | 24.153 | 18.270 | 48.946 |
| 2 | AA_A10G11:C2U3_BB | -0.541 | -2.233 | 3.499 | 2.878 | 5.489 | 26.928 | -6.005 | 1.830 | 2.922 | 11.594 | -6.078 | 27.619 |
| 3 | AA_G11C12:G1C2_BB | -0.119 | -1.883 | 2.769 | -3.813 | -3.817 | 37.903 | -2.452 | -0.238 | 2.935 | -5.840 | 5.834 | 38.271 |
| 4 | AA_C12C13:G34G1_AB | 0.041 | -1.611 | 2.559 | -12.505 | -3.044 | 39.852 | -2.003 | -1.108 | 2.545 | -4.331 | 17.791 | 41.799 |
| 5 | AA_C13U14:C33G34_AA | 0.760 | -1.665 | 4.393 | 11.970 | 12.332 | 34.195 | -4.580 | 0.812 | 3.660 | 19.519 | -18.946 | 38.155 |
| 6 | AA_U14U15:U32C33_AA | 0.667 | -1.412 | 4.077 | -4.193 | 8.571 | 36.528 | -3.504 | -1.677 | 3.572 | 13.395 | 6.552 | 37.712 |
| 7 | AA_U15U16:A31U32_AA | -0.076 | -0.363 | 2.659 | 9.316 | 14.894 | 32.907 | -2.141 | 1.102 | 2.202 | 24.259 | -15.175 | 37.188 |
| 8 | AA_U16A17:U30A31_AA | -0.096 | -1.087 | 3.356 | -6.630 | 19.603 | 26.950 | -4.816 | -0.832 | 2.086 | 36.072 | 12.200 | 33.861 |
| 9 | AA_A17U18:A29U30_AA | -0.727 | -1.348 | 3.045 | 2.696 | 20.503 | 31.791 | -4.231 | 1.405 | 1.813 | 33.383 | -4.389 | 37.779 |
| 10 | AA_U18A19:U28A29_AA | -0.424 | -1.085 | 3.100 | -18.043 | 7.930 | 24.438 | -3.437 | -2.458 | 2.402 | 15.843 | 36.049 | 31.301 |
| 11 | AA_A19C20:G27U28_AA | -0.627 | -1.163 | 3.012 | 3.263 | 8.535 | 38.739 | -2.579 | 1.254 | 2.649 | 12.653 | -4.838 | 39.761 |
| 12 | AA_C20A21:U26G27_AA | -0.004 | -1.949 | 3.408 | 8.805 | 26.284 | 29.433 | -5.335 | 0.843 | 1.272 | 41.877 | -14.029 | 40.219 |
| 13 | AA_A21G22:A25U26_AA | -3.259 | 0.046 | 2.345 | -10.198 | 10.390 | 60.141 | -0.342 | 2.798 | 2.786 | 10.207 | 10.018 | 61.717 |
| 14 | AA_A82A83:A55A56_AA | 0.664 | -0.682 | 3.638 | 2.191 | 13.065 | -12.875 | -6.391 | 3.500 | 2.946 | -45.371 | 7.609 | -18.454 |
| 15 | AA_A83U84:G54A55_AA | 2.736 | -0.037 | 3.051 | -5.571 | -1.980 | 58.111 | 0.055 | -3.067 | 2.801 | -2.032 | 5.719 | 58.385 |
| 16 | AA_U84C85:G53G54_AA | -2.088 | -3.338 | 2.482 | 6.041 | 13.105 | 13.697 | -11.218 | 6.765 | -1.108 | 42.424 | -19.556 | 19.871 |
| 17 | AA_C85C86:G52G53_AA | 0.056 | -2.566 | 3.573 | -11.290 | 10.196 | 28.784 | -6.315 | -2.012 | 2.368 | 18.933 | 20.965 | 32.481 |
| 18 | AA_C86U87:A51G52_AA | -1.074 | -3.197 | 3.573 | -1.980 | 1.397 | 20.567 | -9.546 | 2.062 | 3.437 | 3.894 | 5.521 | 20.708 |
| 19 | AA_U87G88:C50A51_AA | -0.896 | -1.429 | 2.564 | -3.214 | -1.720 | 32.690 | -2.286 | 1.140 | 2.707 | -3.043 | 5.688 | 32.887 |
| 20 | AA_G88A89:U49C50_AA | 0.762 | -1.178 | 2.736 | -4.895 | 1.188 | 36.472 | -1.998 | -1.750 | 2.578 | 1.888 | 7.775 | 36.807 |
| 21 | AA_A89G90:U116U49_AA | 1.598 | -1.833 | 2.963 | 6.932 | 3.962 | 48.843 | -2.461 | -1.439 | 3.002 | 4.754 | -8.319 | 49.451 |
| 22 | AA_G90C91:G115U116_AA | 0.444 | -1.748 | 3.482 | 2.220 | 16.419 | 29.844 | -5.448 | -0.425 | 2.268 | 29.220 | -3.951 | 34.043 |
| 23 | AA_C91U92:A114G115_AA | 0.240 | -2.170 | 3.510 | -18.106 | 3.382 | 33.325 | -3.783 | -2.759 | 2.796 | 5.414 | 28.985 | 37.950 |
| 24 | AA_U92G95:A112A114_AA | -4.375 | -0.478 | 5.848 | 23.771 | 11.916 | 93.916 | -0.660 | 3.605 | 4.851 | 8.029 | -16.017 | 96.751 |
| 25 | AA_G95C96:G111A112_AA | 1.003 | -2.325 | 3.612 | -9.953 | 23.099 | 24.741 | -6.604 | -2.847 | 0.779 | 42.391 | 18.266 | 35.141 |
| 26 | AA_C96U97:A110G111_AA | -0.271 | -2.075 | 2.999 | -9.205 | 5.007 | 39.065 | -3.507 | -0.528 | 2.717 | 7.329 | 13.473 | 40.393 |
| 27 | AA_U97C98:G109A110_AA | -0.561 | -2.531 | 2.710 | 9.186 | -0.594 | 29.302 | -4.688 | 2.526 | 2.474 | -1.139 | -17.618 | 30.684 |
| 28 | AA_C98U99:A108G109_AA | -0.305 | -1.885 | 3.442 | -1.212 | 5.521 | 28.421 | -4.990 | 0.341 | 3.039 | 11.106 | 2.438 | 28.966 |
| 29 | AA_U99U100:A107A108_AA | 0.832 | -2.093 | 2.671 | -0.738 | 10.937 | 35.050 | -4.406 | -1.395 | 1.936 | 17.634 | 1.190 | 36.673 |
| 30 | AA_U100A101:U106A107_AA | -0.306 | -1.324 | 3.079 | 2.046 | -3.378 | 28.419 | -1.940 | 1.062 | 3.182 | -6.839 | -4.142 | 28.686 |
| 31 | AA_A101G102:A105U106_AA | -4.335 | -1.431 | 3.034 | -4.458 | 19.119 | 52.445 | -2.540 | 4.400 | 2.733 | 20.826 | 4.856 | 55.754 |
| 32 | AA_C59C60:G79G80_AA | -1.323 | -1.482 | 2.762 | 17.591 | 2.897 | 29.258 | -2.852 | 4.257 | 1.586 | 5.174 | -31.419 | 34.160 |
| 33 | AA_C60U61:A78G79_AA | -1.388 | -1.440 | 3.660 | -9.217 | -3.111 | 38.640 | -1.687 | 0.773 | 3.975 | -4.613 | 13.667 | 39.801 |
| 34 | AA_A134G135:C130G131_AA | 3.678 | -2.465 | 2.526 | -2.894 | -7.824 | 45.091 | -2.622 | -4.925 | 2.667 | -10.101 | 3.736 | 45.816 |
| 35 | AA_G135G136:C129C130_AA | -0.171 | -1.802 | 3.013 | 10.633 | 1.308 | 27.681 | -3.771 | 2.356 | 2.680 | 2.613 | -21.243 | 29.644 |
| 36 | AA_G136A137:U128C129_AA | 1.202 | -1.784 | 3.693 | 4.624 | 5.590 | 29.741 | -4.607 | -1.263 | 3.451 | 10.692 | -8.844 | 30.594 |
| 37 | AA_A137A138:U127U128_AA | 1.448 | -1.661 | 3.968 | 10.028 | 24.203 | 29.292 | -5.738 | -0.814 | 2.355 | 39.377 | -16.315 | 39.107 |
| 38 | AA_A138U140:A157U127_AA | -4.146 | -3.993 | 2.314 | -0.581 | 7.072 | 100.464 | -2.668 | 2.687 | 2.123 | 4.596 | 0.378 | 100.647 |
| 39 | AA_U140A141:G156A157_AA | 5.074 | -0.379 | 3.085 | 7.178 | -11.250 | -11.257 | 4.797 | 18.994 | -0.330 | 42.171 | 26.906 | -17.442 |
| 40 | AA_A141G142:C155G156_AA | -0.175 | -0.861 | 3.734 | -11.778 | 19.183 | 63.418 | -1.627 | -0.361 | 3.367 | 17.673 | 10.850 | 66.900 |
| 41 | AA_G142G143:U154C155_AA | -0.541 | -2.758 | 2.821 | -2.757 | -0.143 | 18.601 | -8.376 | 0.380 | 2.891 | -0.439 | 8.468 | 18.803 |
| 42 | AA_G143G144:C153U154_AA | 0.546 | -1.095 | 3.672 | -0.193 | 4.552 | 47.534 | -1.755 | -0.691 | 3.557 | 5.632 | 0.238 | 47.740 |
| 43 | AA_G144U145:A152C153_AA | -0.355 | -1.182 | 3.110 | 2.518 | 14.423 | 26.178 | -4.852 | 1.134 | 2.138 | 29.125 | -5.084 | 29.932 |
| 44 | AA_U145C146:G151A152_AA | -0.274 | -1.447 | 3.306 | -7.802 | 7.920 | 30.569 | -3.933 | -0.836 | 2.836 | 14.436 | 14.221 | 32.483 |
| 45 | AA_G149U150:A229C230_AA | -0.016 | -1.450 | 3.117 | -11.345 | 3.385 | 25.731 | -3.698 | -2.414 | 2.677 | 7.139 | 23.927 | 28.282 |
| 46 | AA_G177G178:C170C171_AA | 0.632 | -2.541 | 4.129 | -5.564 | -5.638 | 26.253 | -3.517 | -3.157 | 4.347 | -12.068 | 11.909 | 27.402 |
| 47 | AA_G178G179:C169C170_AA | -0.123 | -2.554 | 3.408 | 9.810 | 8.879 | 28.136 | -6.351 | 1.974 | 2.342 | 17.118 | -18.912 | 31.035 |
| 48 | AA_G179U180:A168C169_AA | 1.054 | -1.690 | 2.974 | 1.485 | 12.051 | 33.557 | -4.217 | -1.544 | 2.294 | 20.074 | -2.474 | 35.627 |
| 49 | AA_U180A181:U167A168_AA | 0.534 | -1.073 | 3.045 | 0.487 | 12.870 | 30.447 | -3.791 | -0.868 | 2.414 | 23.243 | -0.879 | 32.999 |
| 50 | AA_A181A39:U166U167_AA | -2.019 | -1.392 | 3.147 | -2.762 | 4.381 | 47.146 | -2.072 | 2.296 | 3.120 | 5.458 | 3.440 | 47.413 |
| 51 | AA_A39U40:A165U166_AA | -0.502 | -2.121 | 2.759 | -3.529 | -5.223 | 31.885 | -2.964 | 0.340 | 3.095 | -9.393 | 6.346 | 32.486 |
| 52 | AA_U40C41:G164A165_AA | -0.487 | -2.187 | 3.506 | -11.752 | 8.140 | 27.418 | -5.716 | -1.403 | 2.739 | 15.879 | 22.923 | 30.858 |
| 53 | AA_C41C42:G163G164_AA | -0.342 | -2.075 | 2.743 | 3.292 | 0.122 | 28.681 | -4.185 | 1.296 | 2.679 | 0.246 | -6.617 | 28.866 |
| 54 | AA_C42U43:G162G163_AA | 0.040 | -1.437 | 3.598 | -7.545 | 8.584 | 43.094 | -2.736 | -0.791 | 3.218 | 11.447 | 10.062 | 44.514 |
| 55 | AA_U43C44:G161G162_AA | -0.526 | -2.040 | 3.304 | 4.650 | -1.423 | 31.599 | -3.445 | 1.808 | 3.281 | -2.594 | -8.477 | 31.962 |
| 56 | AA_C44U45:A159G161_AA | -1.344 | -1.596 | 3.193 | 17.735 | -11.412 | 61.050 | -1.025 | 2.002 | 2.971 | -10.892 | -16.926 | 64.256 |
| 57 | AA_U45U188:A126A159_AA | -1.152 | -1.340 | 5.166 | 25.865 | 7.106 | 113.418 | -0.911 | 1.115 | 4.887 | 4.218 | -15.352 | 115.459 |
| 58 | AA_U188A189:U125A126_AA | 0.314 | -1.774 | 4.534 | -16.754 | 0.609 | 28.765 | -3.244 | -4.381 | 3.755 | 1.115 | 30.657 | 33.204 |
| 59 | AA_A189G190:C124U125_AA | 0.962 | -0.849 | 3.881 | 18.520 | 19.049 | 35.440 | -3.310 | 0.834 | 3.187 | 27.103 | -26.351 | 44.035 |
| 60 | AA_G190U191:A123C124_AA | -0.323 | -1.317 | 3.773 | -17.556 | 19.136 | 27.893 | -4.675 | -1.934 | 2.294 | 32.226 | 29.564 | 37.934 |
| 61 | AA_U191C192:G122A123_AA | 0.895 | -2.154 | 2.459 | 5.421 | -9.052 | 30.826 | -2.472 | -0.775 | 3.063 | -16.436 | -9.843 | 32.540 |
| 62 | AA_C192U193:A120G122_AA | 2.859 | -1.058 | 2.668 | 5.013 | 8.014 | 55.128 | -1.513 | -2.812 | 2.732 | 8.588 | -5.372 | 55.870 |
| 63 | AA_U193A195:U251A120_AA | -0.714 | -0.866 | 3.485 | -5.921 | 13.707 | 67.961 | -1.285 | 0.401 | 3.325 | 12.113 | 5.232 | 69.389 |
| 64 | AA_A195A196:U250U251_AA | 0.951 | -1.887 | 3.459 | 8.888 | 1.744 | 10.182 | -9.937 | 6.077 | 2.967 | 8.040 | -40.971 | 13.620 |
| 65 | AA_C197G215:C245A246_AA | -0.956 | 1.476 | 2.824 | 78.479 | -72.567 | -85.721 | 0.034 | 0.392 | 3.251 | 42.931 | 46.429 | -128.227 |
| 66 | AA_G215U199:A214C245_AA | 5.650 | 1.682 | -0.703 | -122.043 | 83.892 | 25.308 | 1.915 | -1.416 | -3.766 | 48.953 | 71.215 | 148.891 |
| 67 | AA_A200U201:A212U213_AA | 0.216 | -0.499 | 2.630 | -14.904 | 9.236 | 28.709 | -2.036 | -2.264 | 2.031 | 16.794 | 27.101 | 33.544 |
| 68 | AA_U201A202:U211A212_AA | -0.416 | -1.501 | 2.733 | -1.339 | 28.603 | 38.354 | -3.485 | 0.440 | 1.370 | 37.803 | 1.769 | 47.539 |
| 69 | AA_A202U203:A210U211_AA | -0.532 | -2.574 | 2.918 | 2.638 | 1.162 | 24.305 | -6.385 | 1.964 | 2.722 | 2.749 | -6.237 | 24.472 |
| 70 | AA_U203G204:C209A210_AA | -0.325 | -0.920 | 3.507 | -11.886 | 19.886 | 38.443 | -3.094 | -0.697 | 2.728 | 27.388 | 16.370 | 44.657 |
| 71 | AA_G204G205:A208C209_AA | -3.129 | -1.563 | 1.927 | 1.383 | 8.139 | 47.603 | -2.253 | 3.884 | 1.569 | 9.996 | -1.699 | 48.273 |
| 72 | AA_G218G219:C239C240_AA | -0.676 | -1.786 | 2.763 | -10.460 | 10.497 | 28.695 | -4.698 | -0.258 | 2.113 | 19.614 | 19.545 | 32.224 |
| 73 | AA_G219A220:U238C239_AA | 0.326 | -2.105 | 2.969 | -6.587 | -7.689 | 25.166 | -2.565 | -2.347 | 3.270 | -16.805 | 14.396 | 27.096 |
| 74 | AA_A220U221:A237U238_AA | -0.226 | -2.129 | 3.763 | -3.021 | 1.130 | 36.039 | -3.611 | -0.122 | 3.703 | 1.821 | 4.871 | 36.179 |
| 75 | AA_U221A222:U236A237_AA | -0.367 | -1.825 | 2.728 | 3.224 | -3.181 | 28.983 | -3.017 | 1.321 | 2.851 | -6.306 | -6.392 | 29.327 |
| 76 | AA_A222G223:C235U236_AA | 1.074 | -2.292 | 2.962 | 2.741 | 4.025 | 32.073 | -4.724 | -1.501 | 2.742 | 7.232 | -4.926 | 32.431 |
| 77 | AA_G223G224:C234C235_AA | -0.207 | -2.401 | 3.755 | 6.819 | 12.692 | 33.221 | -5.692 | 1.312 | 2.604 | 21.012 | -11.289 | 36.130 |
| 78 | AA_G224A225:A233C234_AA | 0.092 | -1.570 | 3.404 | -1.540 | 13.189 | 40.445 | -3.466 | -0.278 | 2.777 | 18.485 | 2.159 | 42.482 |
|
|
|
ndbadmin@ndbserver.rutgers.edu
©1995-2013 The Nucleic Acid Database Project
Rutgers, The State University of New Jersey
|