NDB ID: UR0057


Title:HIV-1 DIS RNA SUBTYPE F- ZN SOAKED
Molecular Description:5'-R(CpU)-D(p(5BU))-R(pGpCpUpGpApApGpUp
GpCpApCpApCpApGpCpApApG)-3'
Structural Features:SINGLE STRAND, LOOP, HAIRPIN LOOP,
Nucleic Acid Sequence:
ChainsA,B:C U (5BU) G C U G A A G U G C A C A C A G C A A G
Primary Citation:Ennifar, E., Dumas, P.
Polymorphism of Bulged-out Residues in HIV-1 RNA DIS Kissing Complex and Structure Comparison with Solution Studies.
J.Mol.Biol. , 356, pp. 771 - 782, 2006.
Experimental Information:X-RAY DIFFRACTION
Space Group: 21
Cell Constants:
a = 27.275b = 118.629c = 93.334(Ångstroms)
= 90.00 = 90.00 = 90.00(degrees)
Refinement:The structure was refined using the CNS 1.1 program. The R value is 27.0 for 10089 reflections in the resolution range 7.98 to 2.40 Ångstroms with Fobs > 2.0 sigma(Fobs).

Biological Assembly 1
Other Views
Asymmetric Unit
Crystal Packing
RNA View
RNAML File
Enlarge Biological Assembly 1



Coordinate + Structure Data

Asymmetric Unit coordinates (pdb format, Unix compressed(.gz))

Asymmetric Unit coordinates (cif format, Unix compressed(.gz))

Biological Assembly coordinates (pdb format)

Structure Factors (cif format)

XML | Complete with coordinates (xml format, GNU compressed(.gz))
XML | Coordinates only (xml format, GNU compressed(.gz))
XML | Header only (xml format, GNU compressed(.gz))

Derivative Data

Nucleic Acid Backbone Torsions

Base Pair Parameters

Base Pair Step Parameters

Hydrogen Bonding Classification

Links

The RCSB Protein Data Bank: 1YXP

PubMed: 16403527




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