NDB ID: UR0139


Title:E. COLI INITIATOR TRNA
Molecular Description:Initiator tRNA
Structural Features:T SINGLE STRAND, LOOPS, BULGES, FLIPPED-OUT BASES, BASE TRIPLETBASE TRIPLET
Nucleic Acid Sequence:
ChainA:C G C G G G G (4SU) G G A G C A G C C U G G (H2U) A G C U C G U C G G G (OMC) U C A U A A C C C G A A G A U C G U C G G (5MU) (PSU) C A A A U C C G G C C C C C G C A A C C A
Primary Citation:Barraud, P., Schmitt, E., Mechulam, Y., Dardel, F., Tisne, C.
A unique conformation of the anticodon stem-loop is associated with the capacity of tRNAfMet to initiate protein synthesis.
Nucleic Acids Res. , 36, pp. 4894 - 4901, 2008.
Experimental Information:X-RAY DIFFRACTION
Space Group: 64   2
Cell Constants:
a = 93.790b = 93.790c = 219.360(Ångstroms)
= 90.00 = 90.00 = 120.00(degrees)
Refinement:The structure was refined using the REFMAC 5.2 program. The R value is 24.1 for 10063 reflections in the resolution range 39.918 to 3.100 Ångstroms with Fobs > 0.00 sigma(Fobs).

Biological Assembly 1
Other Views
Asymmetric Unit
Crystal Packing
RNA View
RNAML File
Enlarge Biological Assembly 1



Coordinate + Structure Data

Asymmetric Unit coordinates (pdb format, Unix compressed(.gz))

Asymmetric Unit coordinates (cif format, Unix compressed(.gz))

Biological Assembly coordinates (pdb format)

Structure Factors (cif format)

XML | Complete with coordinates (xml format, GNU compressed(.gz))
XML | Coordinates only (xml format, GNU compressed(.gz))
XML | Header only (xml format, GNU compressed(.gz))

Derivative Data

Nucleic Acid Backbone Torsions

Base Pair Parameters

Base Pair Step Parameters

Hydrogen Bonding Classification

Links

The RCSB Protein Data Bank: 3CW5

PubMed: 18653533




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