NDB ID: URL050


Title:THE STRUCTURE OF AN RNA DODECAMER SHOWS HOW TANDEM U-U BASE PAIRS INCREASE THE RANGE OF STABLE RNA STRUCTURES AND THE DIVERSITY OF RECOGNITION SITES
Molecular Description:5'-R(GpGpCpGpCpUpUpGpCpGpUpC)-3'
Structural Features:DOUBLE HELIX, INTERNAL LOOP
Nucleic Acid Sequence:
ChainsA,B,C,D:G G C G C U U G C G U C
Primary Citation:Lietzke, S.E., Barnes, C.L., Berglund, J.A., Kundrot, C.E.
The structure of an RNA dodecamer shows how tandem U-U base pairs increase the range of stable RNA structures and the diversity of recognition sites.
Structure , 4, pp. 917 - 930, 1996.
Experimental Information:X-RAY DIFFRACTION
Space Group: 1
Cell Constants:
a = 29.440b = 28.910c = 46.460(Ångstroms)
= 98.87 = 72.95 = 96.16(degrees)
Refinement:The structure was refined using the X-PLOR program. The R value is 19.1 for 5142 reflections in the resolution range 8.000 to 2.400 Ångstroms with Fobs > 2.000 sigma(Fobs).

Biological Assembly 1
Other Views
Asymmetric Unit
RNA View
RNAML File

Biological Assemblies
Enlarge Biological Assembly 1
Enlarge Biological Assembly 2



Coordinate + Structure Data

Asymmetric Unit coordinates (pdb format, Unix compressed(.gz))

Asymmetric Unit coordinates (cif format, Unix compressed(.gz))

Biological Assembly coordinates (pdb format)12

Structure Factors (cif format)

XML | Complete with coordinates (xml format, GNU compressed(.gz))
XML | Coordinates only (xml format, GNU compressed(.gz))
XML | Header only (xml format, GNU compressed(.gz))

Derivative Data

Nucleic Acid Backbone Torsions

Base Pair Parameters

Base Pair Step Parameters

Hydrogen Bonding Classification

Links

The RCSB Protein Data Bank: 280D

PubMed: 8805576




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