NDB ID: URL064


Title:STRUCTURE OF LOOP E FROM E. COLI 5S RRNA
Molecular Description:5'-R(CpCpGpApUpGpGpUpApGpUpG)-3'
LOOP E FROM 5S RRNA
Structural Features:DOUBLE HELIX, INTERNAL LOOP, OVERHANGING BASE
Nucleic Acid Sequence:
ChainA:C C G A U G G U A G U G
ChainB:G C G A G A G U A (DG) (G46) C
Primary Citation:Correll, C.C., Freeborn, B., Moore, P.B., Steitz, T.A.
Metals, motifs, and recognition in the crystal structure of a 5S rRNA domain.
Cell(Cambridge,Mass.) , 91, pp. 705 - 712, 1997.
Experimental Information:X-RAY DIFFRACTION
Space Group: 1
Cell Constants:
a = 71.184b = 37.654c = 32.944(Ångstroms)
= 90.00 = 105.90 = 90.00(degrees)
Refinement:The structure was refined using the CNS 0.1 program. The R value is 20.2 for 12296 reflections in the resolution range 20.000 to 1.500 Ångstroms with Fobs > 0.000 sigma(Fobs).

Biological Assembly 1
Other Views
Asymmetric Unit
Crystal Packing
RNA View
RNAML File
Enlarge Biological Assembly 1



Coordinate + Structure Data

Asymmetric Unit coordinates (pdb format, Unix compressed(.gz))

Asymmetric Unit coordinates (cif format, Unix compressed(.gz))

Biological Assembly coordinates (pdb format)

XML | Complete with coordinates (xml format, GNU compressed(.gz))
XML | Coordinates only (xml format, GNU compressed(.gz))
XML | Header only (xml format, GNU compressed(.gz))

Derivative Data

Nucleic Acid Backbone Torsions

Base Pair Parameters

Base Pair Step Parameters

Hydrogen Bonding Classification

Links

The RCSB Protein Data Bank: 354D

PubMed: 9393863




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