NDB ID: URT068


Title:CRYSTAL STRUCTURE OF DOMAIN E OF THERMUS FLAVUS 5S RRNA: A HELICAL RNA-STRUCTURE INCLUDING A TETRALOOP
Molecular Description:5'-R(CpUpGpGpGpCpGpGpGpCpGpApCpCpGpCpCp
UpGpG)-3'
Structural Features:SINGLE STRAND, TETRALOOP, HAIRPIN
Nucleic Acid Sequence:
ChainsA,B:C U G G G C G G G C G A C C G C C U G G
Primary Citation:Perbandt, M., Nolte, A., Lorenz, S., Bald, R., Betzel, C., Erdmann, V.A.
Crystal structure of domain E of Thermus flavus 5S rRNA: a helical RNA structure including a hairpin loop.
FEBS Lett. , 429, pp. 211 - 215, 1998.
Experimental Information:X-RAY DIFFRACTION
Space Group: 32   1
Cell Constants:
a = 42.680b = 42.680c = 161.200(Ångstroms)
= 90.00 = 90.00 = 120.00(degrees)
Refinement:The structure was refined using the X-PLOR program. The R value is 24.1 for 3667 reflections in the resolution range 15.000 to 3.000 Ångstroms with Fobs > 0.000 sigma(Fobs).

Biological Assembly 1
Other Views
Asymmetric Unit
Crystal Packing
RNA View
RNAML File

Biological Assemblies
Enlarge Biological Assembly 1
Enlarge Biological Assembly 2



Coordinate + Structure Data

Asymmetric Unit coordinates (pdb format, Unix compressed(.gz))

Asymmetric Unit coordinates (cif format, Unix compressed(.gz))

Biological Assembly coordinates (pdb format)12

XML | Complete with coordinates (xml format, GNU compressed(.gz))
XML | Coordinates only (xml format, GNU compressed(.gz))
XML | Header only (xml format, GNU compressed(.gz))

Derivative Data

Nucleic Acid Backbone Torsions

Base Pair Parameters

Base Pair Step Parameters

Hydrogen Bonding Classification

Links

The RCSB Protein Data Bank: 361D

PubMed: 9650592




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