NDB ID: ZD0007


Title:THE STRUCTURE OF D(TPGPCPGPCPA)2 AT 293K: COMPARISON OF THE EFFECT OF SEQUENCE AND TEMPERATURE
Molecular Description:5'-D(TpGpCpGpCpA)-3'
Structural Features:Z DOUBLE HELIX
Nucleic Acid Sequence:
ChainsA, B: (DT) (DG) (DC) (DG) (DC) (DA)
Primary Citation:Thiyagarajan, S., Satheesh Kumar, P., Rajan, S.S., Gautham, N.
Structure of d(TGCGCA)2 at 293 K: comparison of the effects of sequence and temperature.
Acta Crystallogr.,Sect.D , 58, pp. 1381 - 1384, 2002.
Experimental Information:X-RAY DIFFRACTION
Space Group: 21   21   21
Cell Constants:
a = 21.182b = 28.363c = 44.440(Ångstroms)
= 90.00 = 90.00 = 90.00(degrees)
Crystallization Conditions:
Method:VAPOR DIFFUSION, HANGING DROP
Drop:cacodylate, MgCl2, cobalt hexaamine chloride, MPD
Refinement:The structure was refined using the CNS program. The R value is 21.2 for 3368 reflections in the resolution range 19.0 to 1.64 Ångstroms with Fobs > 1.0 sigma(Fobs).

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Coordinate + Structure Data

Asymmetric Unit coordinates (pdb format, Unix compressed(.gz))

Asymmetric Unit coordinates (cif format, Unix compressed(.gz))

Biological Unit coordinates (pdb format)

Structure Factors (cif format)

XML | Complete with coordinates (xml format, GNU compressed(.gz))
XML | Coordinates only (xml format, GNU compressed(.gz))
XML | Header only (xml format, GNU compressed(.gz))

Derivative Data

Nucleic Acid Backbone Torsions

Base Pair Parameters

Base Pair Step Parameters

Hydrogen Bonding Classification

Links

The Protein Data Bank: 1LJX

PubMed: 12136163




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