NDB ID: ZD0010


Title:THE CRYSTAL STRUCTURE OF D(CACG(5IU)G)
Molecular Description:5'-D(CpApCpGp(5IU)pG)-3'
Structural Features:Z DOUBLE HELIX
Nucleic Acid Sequence:
ChainsA, B: (DC) (DA) (DC) (DG) (5IU) (DG)
Primary Citation:Schuerman, G., Van Hecke, K., Van Meervelt, L.
Exploration of the influence of 5-iodo-2'-deoxyuridine incorporation on the structure of d[CACG(IDU)G].
Acta Crystallogr.,Sect.D , 59, pp. 1525 - 1528, 2003.
Experimental Information:X-RAY DIFFRACTION
Space Group: 21   21   21
Cell Constants:
a = 18.155b = 30.034c = 41.988(Ångstroms)
= 90.00 = 90.00 = 90.00(degrees)
Crystallization Conditions:
Method:VAPOR DIFFUSION, HANGING DROP
Drop:potassium cacodylate, MPD, magnesium chloride, potassium chloride, cobalt hexamine
Reservoir:MPD, potassium cacodylate, magnesium chloride, potassium chloride
Refinement:The structure was refined using the SHELXL-93 program. The R value is unavailable for 5036 reflections in the resolution range 20.0 to 1.30 Ångstroms with Fobs > 4.0 sigma(Fobs).

Biological Unit 1
Other Views
Asymmetric Unit
Crystal Packing
Enlarge Biological Unit 1



Coordinate + Structure Data

Asymmetric Unit coordinates (pdb format, Unix compressed(.gz))

Asymmetric Unit coordinates (cif format, Unix compressed(.gz))

Biological Unit coordinates (pdb format)

Structure Factors (cif format)

XML | Complete with coordinates (xml format, GNU compressed(.gz))
XML | Coordinates only (xml format, GNU compressed(.gz))
XML | Header only (xml format, GNU compressed(.gz))

Derivative Data

Nucleic Acid Backbone Torsions

Base Pair Parameters

Base Pair Step Parameters

Hydrogen Bonding Classification

Links

The Protein Data Bank: 1OMK

PubMed: 12876373




ndbadmin@ndbserver.rutgers.edu
©1995-2007 The Nucleic Acid Database Project
Rutgers, The State University of New Jersey