NDB ID: ZDF001


Title:MOLECULAR STRUCTURE OF A LEFT-HANDED DOUBLE HELICAL DNA FRAGMENT AT ATOMIC RESOLUTION
Molecular Description:5'-D(CpGpCpGpCpG)-3'
MAGNESIUM AND SPERMINE
Structural Features:Z DOUBLE HELIX
Nucleic Acid Sequence:
ChainsA, B: (DC) (DG) (DC) (DG) (DC) (DG)
Primary Citation:Wang, A.H., Quigley, G.J., Kolpak, F.J., Crawford, J.L., van Boom, J.H., van der Marel, G., Rich, A.
Molecular structure of a left-handed double helical DNA fragment at atomic resolution.
Nature , 282, pp. 680 - 686, 1979.
Experimental Information:X-RAY DIFFRACTION
Space Group: 21   21   21
Cell Constants:
a = 17.870b = 31.550c = 44.580(Ångstroms)
= 90.00 = 90.00 = 90.00(degrees)
Crystallization Conditions:
Method:VAPOR DIFFUSION
Drop:WATER, ISOPROPANOL, Spermine HCl, MgCl2
Reservoir:WATER, ISOPROPANOL
Refinement:The structure was refined using the NUCLSQ program. The R value is 14 for 15000 reflections in the resolution of 0.900 with I > 2.000 sigma(I).

Biological Unit 1
Other Views
Asymmetric Unit
Crystal Packing
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Coordinate + Structure Data

Asymmetric Unit coordinates (pdb format, Unix compressed(.gz))

Asymmetric Unit coordinates (cif format, Unix compressed(.gz))

Biological Unit coordinates (pdb format)

XML | Complete with coordinates (xml format, GNU compressed(.gz))
XML | Coordinates only (xml format, GNU compressed(.gz))
XML | Header only (xml format, GNU compressed(.gz))

Derivative Data

Nucleic Acid Backbone Torsions

Base Pair Parameters

Base Pair Step Parameters

Hydrogen Bonding Classification

Links

The Protein Data Bank: 2DCG

PubMed: 514347




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