NDB ID: ZDF035


Title:THE LOW-TEMPERATURE CRYSTAL STRUCTURE OF THE PURE-SPERMINE FORM OF Z-DNA REVEALS BINDING OF A SPERMINE MOLECULE IN THE MINOR GROOVE
Molecular Description:5'-D(CpGpCpGpCpG)-3'
SPERMINE
-110C
Structural Features:Z DOUBLE HELIX
Nucleic Acid Sequence:
ChainsA, B: (DC) (DG) (DC) (DG) (DC) (DG)
Primary Citation:Bancroft, D., Williams, L.D., Rich, A., Egli, M.
The low-temperature crystal structure of the pure-spermine form of Z-DNA reveals binding of a spermine molecule in the minor groove.
Biochemistry , 33, pp. 1073 - 1086, 1994.
Experimental Information:X-RAY DIFFRACTION
Space Group: 21   21   21
Cell Constants:
a = 18.265b = 30.690c = 42.460(Ångstroms)
= 90.00 = 90.00 = 90.00(degrees)
Crystallization Conditions:
Method:VAPOR DIFFUSION, SITTING DROP
Drop:WATER, SPERMINE
Reservoir:WATER, MPD
Refinement:The structure was refined using the PROLSQ (MODIFIED BY G.J.QUIGLEY) program. The R value is 18 for 9575 reflections in the resolution range 5.000 to 1.000 Ångstroms with Fobs > 2.000 sigma(Fobs).

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Coordinate + Structure Data

Asymmetric Unit coordinates (pdb format, Unix compressed(.gz))

Asymmetric Unit coordinates (cif format, Unix compressed(.gz))

Biological Unit coordinates (pdb format)

XML | Complete with coordinates (xml format, GNU compressed(.gz))
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Derivative Data

Nucleic Acid Backbone Torsions

Base Pair Parameters

Base Pair Step Parameters

Hydrogen Bonding Classification

Links

The Protein Data Bank: 131D

PubMed: 8110738




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