NDB ID: ZDFB03


Title:MOLECULAR STRUCTURE OF (M5DC-DG)3: THE ROLE OF THE METHYL GROUP ON 5-METHYL CYTOSINE IN STABILIZING Z-DNA
Molecular Description:5'-D((CH3)CpGp(CH3)CpGp(CH3)CpG)-3'
Structural Features:Z DOUBLE HELIX
Nucleic Acid Sequence:
ChainsA,B:(5CM) (DG) (5CM) (DG) (5CM) (DG)
Primary Citation:Fujii, S., Wang, A.H.-J., Van Der Marel, G.A., Van Boom, J.H., Rich, A.
Molecular Structure of (m5dC-dG)3: The Role of the Methyl Group on 5-Methyl Cytosine in Stabilizing Z-DNA
Nucleic Acids Res. , 10, pp. 7879 - 7892, 1982.
Experimental Information:X-RAY DIFFRACTION
Space Group: 21   21   21
Cell Constants:
a = 17.760b = 30.570c = 45.420(Ångstroms)
= 90.00 = 90.00 = 90.00(degrees)
Refinement:The structure was refined using the NUCLSQ program. The R value is 15.6 for 4208 reflections in the resolution of 1.300 with I > 1.500 sigma(I).

Biological Assembly 1
Other Views
Asymmetric Unit
Crystal Packing
Enlarge Biological Assembly 1



Coordinate + Structure Data

Asymmetric Unit coordinates (pdb format, Unix compressed(.gz))

Asymmetric Unit coordinates (cif format, Unix compressed(.gz))

Biological Assembly coordinates (pdb format)

XML | Complete with coordinates (xml format, GNU compressed(.gz))
XML | Coordinates only (xml format, GNU compressed(.gz))
XML | Header only (xml format, GNU compressed(.gz))

Derivative Data

Nucleic Acid Backbone Torsions

Base Pair Parameters

Base Pair Step Parameters

Hydrogen Bonding Classification

Links

The RCSB Protein Data Bank: 1VTV

PubMed: 7155900




ndbadmin@ndbserver.rutgers.edu
©1995-2013 The Nucleic Acid Database Project
Rutgers, The State University of New Jersey