NDB ID: ZDFB10


Title:BASE SPECIFIC BINDING OF COPPER(II) TO Z-DNA: THE 1.3-ANGSTROMS SINGLE CRYSTAL STRUCTURE OF D(M5CGUAM5CG) IN THE PRESENCE OF CUCL2
Molecular Description:5'-D((5CM)pGpUpAp(5CM)pG)-3'
COPPER(II) CHLORIDE SOAKED
Structural Features:Z DOUBLE HELIX
Nucleic Acid Sequence:
ChainsA,B:(5CM) (DG) (DU) (DA) (5CM) (DG)
Primary Citation:Geierstanger, B.H., Kagawa, T.F., Chen, S.L., Quigley, G.J., Ho, P.S.
Base-specific binding of copper(II) to Z-DNA. The 1.3-A single crystal structure of d(m5CGUAm5CG) in the presence of CuCl2.
J.Biol.Chem. , 266, pp. 20185 - 20191, 1991.
Experimental Information:X-RAY DIFFRACTION
Space Group: 21   21   21
Cell Constants:
a = 17.590b = 30.580c = 44.520(Ångstroms)
= 90.00 = 90.00 = 90.00(degrees)
Refinement:The structure was refined using the NUCLSQ program. The R value is 20.9 for 2587 reflections in the resolution of 1.300 with I > 2.000 sigma(I).

Biological Assembly 1
Other Views
Asymmetric Unit
Crystal Packing
Enlarge Biological Assembly 1



Coordinate + Structure Data

Asymmetric Unit coordinates (pdb format, Unix compressed(.gz))

Asymmetric Unit coordinates (cif format, Unix compressed(.gz))

Biological Assembly coordinates (pdb format)

Structure Factors (cif format)

XML | Complete with coordinates (xml format, GNU compressed(.gz))
XML | Coordinates only (xml format, GNU compressed(.gz))
XML | Header only (xml format, GNU compressed(.gz))

Derivative Data

Nucleic Acid Backbone Torsions

Base Pair Parameters

Base Pair Step Parameters

Hydrogen Bonding Classification

Links

The RCSB Protein Data Bank: 1D40

PubMed: 1939079




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