PDB data file name: /ftp/NDB/coordinates/na-biol-mirror/1b97.pdb1 uncommon residue DA 1 on chain C [#1] assigned to: a uncommon residue DA 2 on chain C [#2] assigned to: a uncommon residue DA 3 on chain C [#3] assigned to: a uncommon residue DG 4 on chain C [#4] assigned to: g uncommon residue DA 5 on chain C [#5] assigned to: a uncommon residue DT 6 on chain C [#6] assigned to: u uncommon residue DA 7 on chain C [#7] assigned to: a uncommon residue DT 8 on chain C [#8] assigned to: u uncommon residue DC 9 on chain C [#9] assigned to: c uncommon residue DT 10 on chain C [#10] assigned to: u uncommon residue DT 11 on chain C [#11] assigned to: u uncommon residue DA 1 on chain D [#12] assigned to: a uncommon residue DA 2 on chain D [#13] assigned to: a uncommon residue DA 3 on chain D [#14] assigned to: a uncommon residue DG 4 on chain D [#15] assigned to: g uncommon residue DA 5 on chain D [#16] assigned to: a uncommon residue DT 6 on chain D [#17] assigned to: u uncommon residue DA 7 on chain D [#18] assigned to: a uncommon residue DT 8 on chain D [#19] assigned to: u uncommon residue DC 9 on chain D [#20] assigned to: c uncommon residue DT 10 on chain D [#21] assigned to: u uncommon residue DT 11 on chain D [#22] assigned to: u BEGIN_base-pair 2_22, C: 2 a-u 11 D: -/- cis syn XX 3_21, C: 3 a-u 10 D: -/- cis XX 4_20, C: 4 g-c 9 D: +/+ cis XIX 5_19, C: 5 a-u 8 D: -/- cis XX 6_18, C: 6 u-a 7 D: -/- cis XX 7_17, C: 7 a-u 6 D: -/- cis XX 8_16, C: 8 u-a 5 D: -/- cis XX 9_15, C: 9 c-g 4 D: +/+ cis XIX 10_11, C: 10 u-u 11 C: syn stacked 10_14, C: 10 u-a 3 D: -/- cis XX 11_13, C: 11 u-a 2 D: -/- cis syn syn XX END_base-pair The total base pairs = 10 (from 22 bases) ------------------------------------------------ Standard WW--cis WW-tran HH--cis HH-tran SS--cis SS-tran 10 0 0 0 0 0 0 WH--cis WH-tran WS--cis WS-tran HS--cis HS-tran 0 0 0 0 0 0 ------------------------------------------------