CELL DIMENSIONS FOR MISMATCHED A-RNA'S ------------------------------------------------------------------------------ NDB ID Descriptor/a b c Alpha Beta Gamma SpcGrp Coord ------------------------------------------------------------------------------ AR0001 5'-R(*CP*GP*CP*CP*AP*GP*CP*G)-3' R 3 2 Y 42.74 42.74 123.90 90.00 90.00 120.00 AR0002 5'- R 3 Y R(*GP*CP*AP*GP*AP*CP*UP*UP*AP*AP*AP*UP*CP*UP*GP*C) -3' 42.56 42.56 124.05 90.00 90.00 120.00 AR0004 5'-R(*CP*CP*CP*IP*UP*GP*GP*G)-3' P 21 Y 33.44 43.41 49.39 90.00 104.70 90.00 AR0005 5'-R(*UP*GP*AP*GP*CP*UP*UP*CP*GP*GP*CP*UP*C)-3' C 2 Y 38.49 32.30 38.76 90.00 117.56 90.00 AR0006 5'- R 3 Y R(*GP*CP*AP*GP*AP*GP*UP*UP*AP*AP*AP*UP*CP*UP*GP*C) -3' 42.53 42.53 128.06 90.00 90.00 120.00 AR0007 5'-R(*GP*AP*UP*CP*AP*CP*UP*UP*CP*GP*GP*U)-3' C 2 Y 71.34 39.98 32.47 90.00 104.70 90.00 AR0008 5'-R(*GP*GP*UP*AP*UP*UP*GP*CP*GP*GP*UP*AP*CP*C)-3' P 63 2 2 Y 45.40 45.40 147.90 90.00 90.00 120.00 AR0009 5'-R(*UP*AP*GP*CP*UP*CP*C)-3', 5'- P 1 Y R(*GP*GP*GP*GP*CP*UP*A)-3' 26.30 28.90 28.90 110.50 96.90 96.90 AR0011 5'-R(*GP*GP*GP*CP*GP*CP*UP*CP*C)-3' R 3 Y 45.68 45.68 59.95 90.00 90.00 120.00 AR0012 5'-R(*CP*UP*GP*GP*GP*CP*GP*G)-3', 5'- R 3 2 Y R(*CP*CP*GP*CP*CP*UP*GP*G)-3' 41.97 41.97 127.14 90.00 90.00 120.00 ------------------------------------------------------------------------------ Page 1 created by the NDB Project on Wed May 26 14:22:32 2004 CELL DIMENSIONS FOR MISMATCHED A-RNA'S ------------------------------------------------------------------------------ NDB ID Descriptor/a b c Alpha Beta Gamma SpcGrp Coord ------------------------------------------------------------------------------ AR0014 5'-R(*UP*AP*GP*CP*UP*CP*C)-3', 5'- P 1 Y R(*GP*GP*GP*GP*CP*(IDO)UP*A)-3' 26.38 29.00 29.00 110.37 96.62 96.62 AR0022 5'-R(*GP*UP*GP*UP*UP*UP*AP*C)-3', 5'- R 3 Y R(*GP*UP*AP*GP*GP*CP*AP*C)-3' 41.92 41.92 56.41 90.00 90.00 120.00 AR0024 29-MER FRAGMENT OF SRP RNA HELIX 6 P 31 2 1 Y 42.98 42.98 231.42 90.00 90.00 120.00 AR0025 5'- C 2 Y R(*UP*GP*(BRO)CP*(BRO)CP*AP*GP*UP*UP*CP*GP*CP*UP*G P*GP*C)-3' 104.45 24.27 104.45 90.00 118.76 90.00 AR0028 REV BINDING ELEMENT P 1 Y 23.99 53.93 64.73 114.52 89.88 102.85 AR0029 (5'- C 2 Y R(*GP*GP*UP*AP*UP*UP*UP*CP*GP*GP*UP*AP*(BRO)CP*C)- 3') 60.06 29.10 52.57 90.00 120.69 90.00 AR0035 5'-R(*GP*GP*CP*GP*AP*CP*(5BU)P*G)-3' P 41 21 2 Y 45.80 45.80 89.65 90.00 90.00 90.00 AR0039 5'- P 63 2 2 Y R(*GP*AP*AP*UP*GP*CP*CP*UP*GP*CP*GP*AP*GP*CP*AP*(B RO)UP*CP*CP*C)-3' 45.34 45.34 95.13 90.00 90.00 120.00 AR0041 5'-R(*GP*CP*GP*UP*CP*AP*GP*GP*UP*CP*(CB2)CP*G)-3' P 43 2 2 Y 35.61 35.61 133.96 90.00 90.00 90.00 AR0044 5'- P 31 2 1 Y R(*CP*UP*UP*GP*CP*UP*GP*AP*GP*GP*UP*GP*CP*AP*CP*AP *CP*AP*GP*CP*AP*AP*G)-3' 59.33 59.33 63.68 90.00 90.00 120.00 ------------------------------------------------------------------------------ Page 2 created by the NDB Project on Wed May 26 14:22:32 2004 CELL DIMENSIONS FOR MISMATCHED A-RNA'S ------------------------------------------------------------------------------ NDB ID Descriptor/a b c Alpha Beta Gamma SpcGrp Coord ------------------------------------------------------------------------------ AR0045 5'- P 31 2 1 Y R(*CP*UP*UP*GP*CP*UP*GP*AP*GP*GP*UP*GP*CP*AP*CP*AP *CP*AP*GP*CP*AP*AP*G)-3' 59.10 59.10 64.10 90.00 90.00 120.00 AR0046 HIV-1 DIS(MAL) DUPLEX RU HEXAMINE-SOAKED P 31 2 1 Y 59.10 59.10 64.10 90.00 90.00 120.00 AR0048 5'-R(*GP*GP*CP*GP*AP*GP*CP*C)-3' P 64 Y 69.65 69.65 68.36 90.00 90.00 120.00 AR0049 5'-R(*GP*IP*CP*GP*AP*GP*CP*C)-3' P 64 Y 69.65 69.65 67.81 90.00 90.00 120.00 ARHB90 5'-R(*CP*GP*CP*AP*IP*GP*CP*G)-3' P 61 2 2 Y 39.05 39.05 58.85 90.00 90.00 120.00 ARL037 5'-R(*P*GP*GP*AP*CP*UP*UP*CP*GP*GP*UP*CP*C)-3' C 2 Y 38.28 32.28 36.38 90.00 124.80 90.00 ARL048 5'-R(*CP*GP*CP*GP*AP*AP*UP*UP*AP*GP*CP*G)-3' P 21 Y 41.69 34.62 32.13 90.00 127.60 90.00 UR0025 RNA BCh12, Short and Long strands C 2 Y 30.17 62.51 50.93 90.00 98.76 90.00 URL029 5'-R(*GP*GP*AP*CP*UP*UP*UP*GP*GP*UP*CP*C)-3' P 41 Y 32.44 32.44 85.48 90.00 90.00 90.00 ------------------------------------------------------------------------------ Page 3 created by the NDB Project on Wed May 26 14:22:32 2004