CELL DIMENSIONS FOR RNA DRUG COMPLEXES ------------------------------------------------------------------------------- NDB ID Descriptor/a b c Alpha Beta Gamma SpcGrp Coord ------------------------------------------------------------------------------- AR0015 5'- C 2 Y R(*(2ME)CP*(2ME)GP*(2ME)CP*(2ME)GP*(2ME)AP*(2ME)AP *(2ME)UP*(2ME)UP*(2ME)CP*( 2ME)GP*(2ME)CP*(2ME)G)- 3' 41.20 34.44 46.62 90.00 92.40 90.00 AR0016 5'- C 2 Y R(*(2ME)CP*(2ME)GP*(2ME)CP*(2ME)GP*(2ME)AP*(2ME)AP *(2ME)UP*(2ME)UP*(2ME)CP*( 2ME)GP*(2ME)CP*(2ME)G)- 3' 41.32 34.55 46.60 90.00 92.30 90.00 AR0017 5'- C 2 Y R(*(2ME)CP*(2ME)GP*(2ME)CP*(2ME)GP*(2ME)AP*(2ME)AP *(2ME)UP*(2ME)UP*(2ME)CP*(2ME)GP*(2ME)CP*(2ME)G)- 3' 42.00 35.60 47.14 90.00 93.20 90.00 AR0018 5'- C 2 Y R(*(2ME)CP*(2ME)GP*(2ME)CP*(2ME)GP*(2ME)AP*(2ME)AP *(2ME)UP*(2ME)UP*(2ME)CP*( 2ME)GP*(2ME)CP*(2ME)G)- 3' 44.06 35.40 48.34 90.00 95.00 90.00 DR0004 RNA APTAMER/COBALAMIN I 2 2 2 Y 91.27 98.08 217.97 90.00 90.00 90.00 DR0005 BIOTIN-BINDING RNA PSEUDOKNOT, BIOTIN C 2 Y 47.59 30.96 62.11 90.00 111.88 90.00 DR0006 16S-rRNA A-SITE, PAROMOMYCIN P 21 21 21 Y 33.00 45.90 95.30 90.00 90.00 90.00 DR0007 5'- P 21 Y R(*UP*UP*GP*CP*GP*UP*CP*AP*CP*AP*CP*CP*GP*GP*UP*GP *AP*AP*GP*UP*CP*GP*C)-3',TOBRAMYCIN 46.90 32.80 52.00 90.00 107.90 90.00 DR0008 5'- P 21 Y R(*CP*GP*CP*GP*UP*CP*AP*CP*AP*CP*CP*GP*GP*UP*GP*AP *AP*GP*UP*CP*GP*C)-3', geneticin 46.20 33.18 51.74 90.00 104.13 90.00 DRB002 5'-R(*AP*A)-3', PROFLAVINE P 21 21 2 Y 32.16 21.45 10.18 90.00 90.00 90.00 ------------------------------------------------------------------------------- Page 1 created by the NDB Project on Wed May 26 14:22:37 2004 CELL DIMENSIONS FOR RNA DRUG COMPLEXES ------------------------------------------------------------------------------- NDB ID Descriptor/a b c Alpha Beta Gamma SpcGrp Coord ------------------------------------------------------------------------------- DRB003 5'-R(*AP*U)-3', 9-AMINOACRIDINE P 21 Y 13.26 26.68 6.92 90.00 95.08 90.00 DRB005 5'-R(*CP*AP*)-3', PROFLAVINE P 42 21 2 Y 19.38 19.38 27.10 90.00 90.00 90.00 DRB006 5'-R(*CP*G)-3', ETHIDIUM P 21 Y 13.64 32.16 14.93 90.00 114.80 90.00 DRB007 5'-R(*CP*G)-3', ETHIDIUM P 21 Y 13.79 31.94 15.66 90.00 117.50 90.00 DRB008 5'-R(*CP*G)-3', PROFLAVINE C 2 Y 29.53 12.95 16.90 90.00 121.96 90.00 DRB010 5'-R(*CP*G)-3', ACRIDINE ORANGE P 1 n.a. 12.65 11.79 15.74 92.69 107.02 90.05 DRB018 5'-R(*UP*A)-3', ETHIDIUM P 21 Y 13.70 31.67 15.13 90.00 113.90 90.00 DRBB01 5'-R(*(I)CP*G)-3', ACRIDINE ORANGE P 21 Y 14.36 19.64 20.67 90.00 102.50 90.00 DRBB09 5'-R(*(I)CP*G)-3', 9-AMINOACRIDINE P 21 Y 13.98 30.58 22.47 90.00 113.90 90.00 DRBB11 5'-R(*(I)CP*G)-3', ELLIPTICINE P 21 Y 13.88 19.11 21.42 90.00 105.40 90.00 ------------------------------------------------------------------------------- Page 2 created by the NDB Project on Wed May 26 14:22:37 2004 CELL DIMENSIONS FOR RNA DRUG COMPLEXES ------------------------------------------------------------------------------- NDB ID Descriptor/a b c Alpha Beta Gamma SpcGrp Coord ------------------------------------------------------------------------------- DRBB12 5'-R(*(I)CP*G)-3', ETHIDIUM P 21 Y 14.06 32.34 16.53 90.00 117.80 90.00 DRBB13 5'-R(*(I)CP*G)-3', 2-METHYL-4-NITROANILINE P 43 21 2 Y ETHYLENE DIMETHYLAMMONIUM HYDROBROMIDE (MNAED) 32.19 32.19 23.96 90.00 90.00 90.00 DRBB14 5'-R(*(I)CP*G)-3', N,N-DIMETHYLPROFLAVINE P 1 Y 11.78 14.55 15.50 89.20 86.20 96.40 DRBB15 5'-R(*(I)CP*G)-3', N,N-DIMETHYLPROFLAVINE P 21 Y 14.20 19.00 20.73 90.00 103.60 90.00 DRBB16 5'-R(*(I)CP*G)-3', PROFLAVINE C 2 Y 32.14 22.23 18.42 90.00 123.30 90.00 DRBB17 5'-R(*(I)CP*G)-3', 3,5,6,8-TETRAMETHYL-N-METHYL P 21 Y PHENANTHROLINIUM 13.99 19.12 21.31 90.00 104.90 90.00 DRBB19 5'-R(*(I)UP*A)-3', ETHIDIUM C 2 Y 28.45 13.54 34.13 90.00 98.60 90.00 DRD004 5'-R(*CP*A)-3', PROFLAVINE C 2 Y 29.08 13.56 28.24 90.00 111.13 90.00 UR0011 MALACHITE GREEN RNA APTAMER, TETRAMETHYL-ROSAMINE P 65 2 2 Y 55.30 55.30 143.92 90.00 90.00 120.00 ------------------------------------------------------------------------------- Page 3 created by the NDB Project on Wed May 26 14:22:37 2004