CITATIONS FOR PROTEIN/DNA (STRUCTURAL) ---------------------------------------------------------------------- NDB ID Citation ---------------------------------------------------------------------- PD0001 K.Luger, A.W.Maeder, R.K.Richmond, D.F.Sargent, T.J.Richmond Crystal Structure of the Nucleosome Core Particle at 2.8 A Resolution Nature, 389, 251-260, 1997. PD0074 M.P.Horvath, V.L.Schweiker, J.M.Bevilacqua, J.A.Ruggles, S.C.Schultz Crystal Structure of the Oxytricha Nova Telomere End Binding Protein Complexed with Single Strand DNA Cell (Cambridge,Mass.), 95, 963-974, 1998. PD0087 J.Ding, M.K.Hayashi, Y.Zhang, L.Manche, A.R.Krainer, R.M.Xu Crystal structure of the two-RRM domain of hnRNP A1 (UP1) complexed with single-stranded telomeric DNA Genes Dev., 13, 1102-1115, 1999. PD0119 S.Su, Y.-G.Gao, H.Robinson, Y.C.Liaw, S.P.Edmondson, J.W.Shriver, A.H.-J.Wang Crystal structures of the chromosomal proteins Sso7d/Sac7d bound to DNA containing T-G mismatched base-pairs J.Mol.Biol., 303, 395-403, 2000. PD0120 S.Su, Y.-G.Gao, H.Robinson, Y.C.Liaw, S.P.Edmondson, J.W.Shriver, A.H.-J.Wang Crystal structures of the chromosomal proteins Sso7d/Sac7d bound to DNA containing T-G mismatched base-pairs J.Mol.Biol., 303, 395-403, 2000. PD0137 J.M.Harp, B.L.Hanson, D.E.Timm, G.J.Bunick Asymmetries in the nucleosome core particle at 2.5 resolution Acta Crystallogr., Sect.D, 56, 1513-1534, 2000. PD0143 S.Su, Y.G.Gao, H.Robinson, Y.C.Liaw, S.P.Edmondson, J.W.Shriver, A.H.Wang Crystal structures of the chromosomal proteins Sso7d/Sac7d bound to DNA containing T-G mismatched base-pairs. J.Mol.Biol., 303, 395-403, 2000. ---------------------------------------------------------------------- Page 1 created by the NDB Project on Wed May 26 14:27:13 2004 CITATIONS FOR PROTEIN/DNA (STRUCTURAL) ---------------------------------------------------------------------- NDB ID Citation ---------------------------------------------------------------------- PD0171 R.K.Suto, M.J.Clarkson, D.J.Tremethick, K.Luger Crystal structure of a nucleosome core particle containing the variant histone H2A Nat.Struct.Biol., 7, 1121-1124, 2000. PD0192 Y.Tanaka, O.Nureki, H.Kurumizaka, S.Fukai, S.Kawaguchi, M.Ikuta, J.Iwahara, T.Okazaki, S.Yokoyama Crystal Structure of the CENP-B Protein-DNA Complex: the DNA-Binding Domains of CENP-B Induce Kinks in the CENP-B Box DNA Embo J., 20, 6612-6618, 2001. PD0209 C.L.White, R.K.Suto, K.Luger Structure of the Yeast Nucleosome Core Particle Reveals Fundamental Changes in Internucleosome Interactions Embo J., 20, 5207-5218, 2001. PD0218 M.P.Horvath, S.C.Schultz DNA G-Quartets in a 1.86 A Resolution Structure of an Oxytricha Nova Telomeric Protein-DNA Complex J.Mol.Biol., 310, 367-377, 2001. PD0266 S.Classen, J.A.Ruggles, S.C.Schultz Crystal Structure of the N-terminal domain of Oxytricha nova Telomere End Binding Protein Alpha Subunit both Uncomplexed and Complexed with Telomeric ssDNA J.Mol.Biol., 314, 1113-1125, 2001. PD0278 O.B.Peersen, J.A.Ruggles, S.C.Schultz Dimeric Structure of the O. nova Telomere End Binding Protein Alpha-Subunit with Bound ssDNA Nat.Struct.Biol., 9, 182-187, 2002. PD0285 C.A.Davey, D.F.Sargent, K.Luger, A.W.Maeder, T.J.Richmond Solvent Mediated Interactions in the Structure of the Nucleosome Core Particle at 1.9 A Resolution J.Mol.Biol., 319, 1097-1113, 2002. ---------------------------------------------------------------------- Page 2 created by the NDB Project on Wed May 26 14:27:13 2004 CITATIONS FOR PROTEIN/DNA (STRUCTURAL) ---------------------------------------------------------------------- NDB ID Citation ---------------------------------------------------------------------- PD0286 C.A.Davey, D.F.Sargent, K.Luger, A.W.Maeder, T.J.Richmond Solvent Mediated Interactions in the Structure of the Nucleosome Core Particle at 1.9 A Resolution J.Mol.Biol., 319, 1097-1113, 2002. PD0287 C.A.Davey, D.F.Sargent, K.Luger, A.W.Maeder, T.J.Richmond Solvent Mediated Interactions in the Structure of the Nucleosome Core Particle at 1.9 A Resolution J.Mol.Biol., 319, 1097-1113, 2002. PD0328 R.K.Suto, R.S.Edayathumangalam, C.L.White, C.Melander, J.M.Gottesfeld, P.B.Dervan, K.Luger Crystal Structures of Nucleosome Core Particles in Complex with Minor Groove DNA-binding Ligands J.Mol.Biol., 326, 371-380, 2003. PD0329 R.K.Suto, R.S.Edayathumangalam, C.L.White, C.Melander, J.M.Gottesfeld, P.B.Dervan, K.Luger Crystal Structures of Nucleosome Core Particles in Complex with Minor Groove DNA-binding Ligands J.Mol.Biol., 326, 371-380, 2003. PD0330 R.K.Suto, R.S.Edayathumangalam, C.L.White, C.Melander, J.M.Gottesfeld, P.B.Dervan, K.Luger Crystal Structures of Nucleosome Core Particles in Complex with Minor Groove DNA-binding Ligands J.MOL.BIOL., 326, 371-380, 2003. PD0413 U.M.Muthurajan, Y.Bao, L.J.Forsberg, R.S.Edayathumangalam, P.N.Dyer, C.L.White, K.Luger Crystal structures of histone Sin mutant nucleosomes reveal altered protein-DNA interactions EMBO J., 23, 260-271, 2004. PD0414 U.M.Muthurajan, Y.Bao, L.J.Forsberg, R.S.Edayathumangalam, P.N.Dyer, C.L.White, K.Luger Crystal structures of histone Sin mutant nucleosomes reveal altered protein-DNA interactions EMBO J., 23, 260-271, 2004. ---------------------------------------------------------------------- Page 3 created by the NDB Project on Wed May 26 14:27:13 2004 CITATIONS FOR PROTEIN/DNA (STRUCTURAL) ---------------------------------------------------------------------- NDB ID Citation ---------------------------------------------------------------------- PD0415 U.M.Muthurajan, Y.Bao, L.J.Forsberg, R.S.Edayathumangalam, P.N.Dyer, C.L.White, K.Luger Crystal structures of histone Sin mutant nucleosomes reveal altered protein-DNA interactions EMBO J., 23, 260-271, 2004. PD0416 U.M.Muthurajan, Y.Bao, L.J.Forsberg, R.S.Edayathumangalam, P.N.Dyer, C.L.White, K.Luger Crystal structures of histone Sin mutant nucleosomes reveal altered protein-DNA interactions EMBO J., 23, 260-271, 2004. PD0417 U.M.Muthurajan, Y.Bao, L.J.Forsberg, R.S.Edayathumangalam, P.N.Dyer, C.L.White, K.Luger Crystal structures of histone Sin mutant nucleosomes reveal altered protein-DNA interactions EMBO J., 23, 260-271, 2004. PD0418 U.M.Muthurajan, Y.Bao, L.J.Forsberg, R.S.Edayathumangalam, P.N.Dyer, C.L.White, K.Luger Crystal structures of histone Sin mutant nucleosomes reveal altered protein-DNA interactions EMBO J., 23, 260-271, 2004. PD0419 U.M.Muthurajan, Y.Bao, L.J.Forsberg, R.S.Edayathumangalam, P.N.Dyer, C.L.White, K.Luger Crystal structures of histone Sin mutant nucleosomes reveal altered protein-DNA interactions EMBO J., 23, 260-271, 2004. PD0420 U.M.Muthurajan, Y.Bao, L.J.Forsberg, R.S.Edayathumangalam, P.N.Dyer, C.L.White, K.Luger Crystal structures of histone Sin mutant nucleosomes reveal altered protein-DNA interactions EMBO J., 23, 260-271, 2004. PD0421 U.M.Muthurajan, Y.Bao, L.J.Forsberg, R.S.Edayathumangalam, P.N.Dyer, C.L.White, K.Luger Crystal structures of histone Sin mutant nucleosomes reveal altered protein-DNA interactions EMBO J., 23, 260-271, 2004. ---------------------------------------------------------------------- Page 4 created by the NDB Project on Wed May 26 14:27:13 2004 CITATIONS FOR PROTEIN/DNA (STRUCTURAL) ---------------------------------------------------------------------- NDB ID Citation ---------------------------------------------------------------------- PD0422 U.M.Muthurajan, Y.Bao, L.J.Forsberg, R.S.Edayathumangalam, P.N.Dyer, C.L.White, K.Luger Crystal structures of histone Sin mutant nucleosomes reveal altered protein-DNA interactions EMBO J., 23, 260-271, 2004. PD0423 U.M.Muthurajan, Y.Bao, L.J.Forsberg, R.S.Edayathumangalam, P.N.Dyer, C.L.White, K.Luger Crystal structures of histone Sin mutant nucleosomes reveal altered protein-DNA interactions EMBO J., 23, 260-271, 2004. PD0426 K.K.Swinger, K.M.Lemberg, Y.Zhang, P.A.Rice Flexible DNA bending in HU-DNA cocrystal structures Embo J., 22, 3749-3760, 2003. PD0430 K.S.Swinger, K.M.Lemberg, Y.Zhang, P.A.Rice Flexible DNA bending in HU-DNA cocrystal structures Embo J., 22, 3749-3760, 2003. PD0431 K.S.Swinger, K.M.Lemberg, Y.Zhang, P.A.Rice Flexible DNA bending in HU-DNA cocrystal structures Embo J., 22, 3749-3760, 2003. PD0432 L.Govindasamy, K.Hueffer, C.R.Parrish, M.Agbandje-McKenna Structures of host range-controlling regions of the capsids of canine and feline parvoviruses and mutants. J.Virol., 77, 12211-12221, 2003. PD0434 D.L.Theobald, S.C.Schultz Nucleotide shuffling and ssDNA recognition in Oxytricha nova telomere end-binding protein complexes Embo J., 22, 4314-4324, 2003. ---------------------------------------------------------------------- Page 5 created by the NDB Project on Wed May 26 14:27:13 2004 CITATIONS FOR PROTEIN/DNA (STRUCTURAL) ---------------------------------------------------------------------- NDB ID Citation ---------------------------------------------------------------------- PD0435 D.L.Theobald, S.C.Schultz Nucleotide Shuffling and Ssdna Recognition in Oxytricha Nova Telomere End-Binding Protein Complexes Embo J., 22, 4314-4324, 2003. PD0436 D.L.Theobald, S.C.Schultz Nucleotide Shuffling and ssDNA Recognition in Oxytricha Nova Telomere End-Binding Protein Complexes Embo J., 22, 4314-4324, 2003. PD0437 D.L.Theobald, S.C.Schultz Nucleotide Shuffling and ssDNA Recognition in Oxytricha Nova Telomere End-Binding Protein Complexes Embo J., 22, 4314-4324, 2003. PD0438 D.L.Theobald, S.C.Schultz Nucleotide Shuffling and ssDNA Recognition in Oxytricha Nova Telomere End-Binding Protein Complexes Embo J., 22, 4314-4324, 2003. PD0439 D.L.Theobald, S.C.Schultz Nucleotide Shuffling and ssDNA Recognition in Oxytricha Nova Telomere End-Binding Protein Complexes Embo J., 22, 4314-4324, 2003. PD0440 D.L.Theobald, S.C.Schultz Nucleotide Shuffling and ssDNA Recognition in Oxytricha Nova Telomere End-Binding Protein Complexes Embo J., 22, 4314-4324, 2003. PD0441 D.L.Theobald, S.C.Schultz Nucleotide Shuffling and ssDNA Recognition in Oxytricha Nova Telomere End-Binding Protein Complexes Embo J., 22, 4314-4324, 2003. ---------------------------------------------------------------------- Page 6 created by the NDB Project on Wed May 26 14:27:13 2004 CITATIONS FOR PROTEIN/DNA (STRUCTURAL) ---------------------------------------------------------------------- NDB ID Citation ---------------------------------------------------------------------- PD0442 D.L.Theobald, S.C.Schultz Nucleotide Shuffling and Ssdna Recognition in Oxytricha Nova Telomere End-Binding Protein Complexes Embo J., 22, 4314-4324, 2003. PD0443 D.L.Theobald, S.C.Schultz Nucleotide Shuffling and ssDNA Recognition in Oxytricha Nova Telomere End-Binding Protein Complexes Embo J., 22, 4314-4324, 2003. PD0444 D.L.Theobald, S.C.Schultz Nucleotide Shuffling and ssDNA Recognition in Oxytricha Nova Telomere End-Binding Protein Complexes Embo J., 22, 4314-4324, 2003. PD0445 J.C.Myers, S.A.Moore, Y.Shamoo Structure-based incorporation of 6-methyl-8-(2-deoxy-beta- ribofuranosyl)isoxanthopteridine into the human telomeric repeat DNA as a probe for UP1 binding and destabilization of G-tetrad structures J.Biol.Chem., 278, 42300-42306, 2003. PD0451 J.C.Myers, S.A.Moore, Y.Shamoo Structure-based incorporation of 6-methyl-8-(2-deoxy-beta- ribofuranosyl)isoxanthopteridine into the human telomeric repeat DNA as a probe for UP1 binding and destabilization of G-tetrad structures J.BIOL.CHEM., 278, 42300-42306, 2003. PD0468 M.Lei, E.R.Podell, P.Baumann, T.R.Cech DNA self-recognition in the structure of Pot1 bound to telomeric single-stranded DNA Nature, 426, 198-203, 2003. PD0469 M.Lei, E.R.Podell, P.Baumann, T.R.Cech DNA self-recognition in the structure of Pot1 bound to telomeric single-stranded DNA nature, 426, 198-203, 2003. ---------------------------------------------------------------------- Page 7 created by the NDB Project on Wed May 26 14:27:13 2004 CITATIONS FOR PROTEIN/DNA (STRUCTURAL) ---------------------------------------------------------------------- NDB ID Citation ---------------------------------------------------------------------- PDR047 H.Robinson, Y.G.Gao, B.S.Mccrary, S.P.Edmondson, J.W.Shriver, A.H.-J.Wang The Hyperthermophile Chromosomal Protein Sac7D Sharply Kinks DNA Nature, 392, 202-205, 1998. PDR048 H.Robinson, Y.G.Gao, B.S.Mccrary, S.P.Edmondson, J.W.Shriver, A.H.Wang The Hyperthermophile Chromosomal Protein Sac7D Sharply Kinks DNA Nature, 392, 202-205, 1998. PDT035 P.Koenig, R.Giraldo, L.Chapman, D.Rhodes Crystal Structure of the DNA Binding Domain of Yeast RAP1 in Complex with a Telomeric DNA Site Cell(Cambridge,Mass.), 85, 125-136, 1996. PDV002 R.McKenna, D.Xia, P.Willingmann, L.L.Ilag, S.Krishnaswamy, M.G.Rossmann, N.H.Olson, T.S.Baker, N.L.Incardona Atomic Structure of Single-Stranded DNA Bacteriophage PhiX174 and its Functional Implications Nature, 355, 137-143, 1992. PDV005 A.L.Llamas-Saiz, M.Agbandje-McKenna, J.S.L.Parker, A.T.M.Wahid, C.R.Parrish, M.G.Rossmann Structural Analysis of a Mutation in Canine Parvovirus which Controls Antigenicity and Host Range Virology, 225, 65-71, 1996. PDV006 Q.Xie, M.S.Chapman Canine Parvovirus Capsid Structure, Analyzed at 2.9 A Resolution J.Mol.Biol., 264, 497-520, 1996. PDV007 A.L.Llamas-Saiz, M.Agbandje-McKenna, W.R.Wikoff, J.Bratton, P.Tattersall, M.G.Rossmann Structure Determination of Minute Virus of Mice Acta Crystallogr., Sect.D, 53, 93-102, 1997. ---------------------------------------------------------------------- Page 8 created by the NDB Project on Wed May 26 14:27:13 2004