RNA DRUG COMPLEXES

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 NDB ID  Descriptor/Drug Name                      Binding Type           

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 AR0015  5'-                                       n.a.                   
         R(*(2ME)CP*(2ME)GP*(2ME)CP*(2ME)GP*(2ME)                         
         AP*(2ME)AP*(2ME)UP*(2ME)UP*(2ME)CP*(                          
         2ME)GP*(2ME)CP*(2ME)G)-3'                         
 AR0016  5'-                                       n.a.                   
         R(*(2ME)CP*(2ME)GP*(2ME)CP*(2ME)GP*(2ME)                         
         AP*(2ME)AP*(2ME)UP*(2ME)UP*(2ME)CP*(                          
         2ME)GP*(2ME)CP*(2ME)G)-3'                         
 AR0017  5'-                                       n.a.                   
         R(*(2ME)CP*(2ME)GP*(2ME)CP*(2ME)GP*(2ME)                         
         AP*(2ME)AP*(2ME)UP*(2ME)UP*(2ME)CP*(2ME)                         
         GP*(2ME)CP*(2ME)G)-3'                         
 AR0018  5'-                                       n.a.                   
         R(*(2ME)CP*(2ME)GP*(2ME)CP*(2ME)GP*(2ME)                         
         AP*(2ME)AP*(2ME)UP*(2ME)UP*(2ME)CP*(                          
         2ME)GP*(2ME)CP*(2ME)G)-3'                         
 DR0004  RNA APTAMER/COBALAMIN                     n.a.                   
 DR0005  BIOTIN-BINDING RNA PSEUDOKNOT, BIOTIN     INTERCALATION          
 DR0006  16S-rRNA A-SITE, PAROMOMYCIN              INTERCALATION          
 DR0007  5'-                                       INTERCALATION          
         R(*UP*UP*GP*CP*GP*UP*CP*AP*CP*AP*CP*CP*G                         
         P*GP*UP*GP*AP*AP*GP*UP*CP*GP*C)-                         
         3',TOBRAMYCIN                         
 DR0008  5'-                                       INTERCALATION          
         R(*CP*GP*CP*GP*UP*CP*AP*CP*AP*CP*CP*GP*G                         
         P*UP*GP*AP*AP*GP*UP*CP*GP*C)-3',                          
         geneticin                         
 DRB002  5'-R(*AP*A)-3', PROFLAVINE                STACKING               
 DRB003  5'-R(*AP*U)-3', 9-AMINOACRIDINE           STACKING               
 DRB005  5'-R(*CP*AP*)-3', PROFLAVINE              INTERCALATION/STACKING 
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RNA DRUG COMPLEXES

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 NDB ID  Descriptor/Drug Name                      Binding Type           

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 DRB006  5'-R(*CP*G)-3', ETHIDIUM                  INTERCALATION/STACKING 
 DRB007  5'-R(*CP*G)-3', ETHIDIUM                  INTERCALATION/STACKING 
 DRB008  5'-R(*CP*G)-3', PROFLAVINE                INTERCALATION/STACKING 
 DRB010  5'-R(*CP*G)-3', ACRIDINE ORANGE           INTERCALATION/STACKING 
 DRB018  5'-R(*UP*A)-3', ETHIDIUM                  INTERCALATION/STACKING 
 DRBB01  5'-R(*(I)CP*G)-3', ACRIDINE ORANGE        INTERCALATION          
 DRBB09  5'-R(*(I)CP*G)-3', 9-AMINOACRIDINE        INTERCALATION/STACKING 
 DRBB11  5'-R(*(I)CP*G)-3', ELLIPTICINE            INTERCALATION/STACKING 
 DRBB12  5'-R(*(I)CP*G)-3', ETHIDIUM               INTERCALATION/STACKING 
 DRBB13  5'-R(*(I)CP*G)-3', 2-METHYL-4-            STACKING               
         NITROANILINE ETHYLENE DIMETHYLAMMONIUM                          
         HYDROBROMIDE (MNAED)                         
 DRBB14  5'-R(*(I)CP*G)-3', N,N-                   INTERCALATION/STACKING 
         DIMETHYLPROFLAVINE                         
 DRBB15  5'-R(*(I)CP*G)-3', N,N-                   INTERCALATION/STACKING 
         DIMETHYLPROFLAVINE                         
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RNA DRUG COMPLEXES

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 NDB ID  Descriptor/Drug Name                      Binding Type           

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 DRBB16  5'-R(*(I)CP*G)-3', PROFLAVINE             INTERCALATION/STACKING 
 DRBB17  5'-R(*(I)CP*G)-3', 3,5,6,8-TETRAMETHYL-   INTERCALATION/STACKING 
         N-METHYL PHENANTHROLINIUM                         
 DRBB19  5'-R(*(I)UP*A)-3', ETHIDIUM               INTERCALATION/STACKING 
 DRD004  5'-R(*CP*A)-3', PROFLAVINE                INTERCALATION/STACKING 
 UR0011  MALACHITE GREEN RNA APTAMER,              INTERCALATION          
         TETRAMETHYL-ROSAMINE                         
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Page 3 created by the NDB Project on Wed May 26 14:33:15 2004