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As of 31-May-2023 number of released structures: 12820
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Polymer Type: All + Protein Function: All + Structural Features: All + Experimental Method: All

Results: 8828  Download results as an excel file       Gallery view

NDB ID:

 7XX5

PDB ID:

7XX5 

Release:

2023-05-31

Title:

Crystal Structure of Nucleosome-H1.3 Linker Histone Assembly (sticky-169a DNA fragment)

Classification:

DNA BINDING PROTEIN/DNA

Authors:

Adhireksan, Z., Qiuye, B., Lee, P.L., Sharma, D., Padavattan, S., Davey, C.A.

Citation:

Crystal Structure of Nucleosome-H1.0 Linker Histone Assembly (sticky-169a DNA fragment)
To Be Published pp. - 0

Experiment:

 X-RAY DIFFRACTION Resolution:3.19Å R work:0.202R free:0.259

NDB ID:

 7XX6

PDB ID:

7XX6 

Release:

2023-05-31

Title:

Crystal Structure of Nucleosome-H1.0 Linker Histone Assembly (sticky-169a DNA fragment)

Classification:

DNA BINDING PROTEIN/DNA

Authors:

Adhireksan, Z., Qiuye, B., Lee, P.L., Sharma, D., Padavattan, S., Davey, C.A.

Citation:

Crystal Structure of Nucleosome-H1.0 Linker Histone Assembly (sticky-169a DNA fragment)
To Be Published pp. - 0

Experiment:

 X-RAY DIFFRACTION Resolution:3.39Å R work:0.227R free:0.296

NDB ID:

 7XX7

PDB ID:

7XX7 

Release:

2023-05-31

Title:

Crystal Structure of Nucleosome-H1x Linker Histone Assembly (sticky-169a DNA fragment)

Classification:

DNA BINDING PROTEIN/DNA

Authors:

Adhireksan, Z., Qiuye, B., Lee, P.L., Sharma, D., Padavattan, S., Davey, C.A.

Citation:

Diversity in Linker Histone-Nucleosome Interactions Between and Within Variants
To Be Published pp. - 0

Experiment:

 X-RAY DIFFRACTION Resolution:2.7Å R work:0.22R free:0.258

NDB ID:

 8CE2

PDB ID:

8CE2 

Release:

2023-05-31

Title:

X-ray structure of the adduct formed upon reaction of a B-DNA double helical dodecamer with dirhodium tetraacetate

Classification:

DNA

Authors:

Tito, G., Troisi, R., Ferraro, G., Geri, A., Massai, L., Messori, L., Sica, F., Merlino, A.

Citation:

Dirhodium tetraacetate binding to a B-DNA double helical dodecamer probed by X-ray crystallography and mass spectrometry.
Dalton Trans pp. - 2023

Experiment:

 X-RAY DIFFRACTION Resolution:1.24Å R work:0.197R free:0.222

NDB ID:

 7XVL

PDB ID:

7XVL 

Release:

2023-05-24

Title:

Crystal Structure of Nucleosome-H1.0 Linker Histone Assembly (sticky-169an DNA fragment)

Classification:

DNA BINDING PROTEIN/DNA

Authors:

Adhireksan, Z., Qiuye, B., Lee, P.L., Sharma, D., Padavattan, S., Davey, C.A.

Citation:

Crystal Structure of Nucleosome-H1.0 Linker Histone Assembly (sticky-169a DNA fragment)
To Be Published pp. - 0

Experiment:

 X-RAY DIFFRACTION Resolution:3.51Å R work:0.213R free:0.281

NDB ID:

 7XVM

PDB ID:

7XVM 

Release:

2023-05-24

Title:

Crystal Structure of Nucleosome-H5 Linker Histone Assembly (sticky-169a DNA fragment)

Classification:

DNA BINDING PROTEIN/DNA

Authors:

Adhireksan, Z., Qiuye, B., Lee, P.L., Sharma, D., Padavattan, S., Davey, C.A.

Citation:

Crystal Structure of Nucleosome-H1.0 Linker Histone Assembly (sticky-169a DNA fragment)
To Be Published pp. - 0

Experiment:

 X-RAY DIFFRACTION Resolution:2.84Å R work:0.2R free:0.258

NDB ID:

 7YGO

PDB ID:

7YGO 

Release:

2023-05-24

Title:

DNA duplex containing 5OHU-Hg(II)-T base pairs

Classification:

DNA

Authors:

Torigoe, H., Kondo, J., Arakawa, F.

Citation:

Specific binding of Hg 2+ to mismatched base pairs involving 5-hydroxyuracil in duplex DNA.
J.Inorg.Biochem. 241 pp.112125 - 112125 2023

Experiment:

 X-RAY DIFFRACTION Resolution:2.403Å R work:0.204R free:0.237

NDB ID:

 7YGP

PDB ID:

7YGP 

Release:

2023-05-24

Title:

DNA duplex containing 5OHU-T base pairs

Classification:

DNA

Authors:

Torigoe, H., Kondo, J., Arakawa, F.

Citation:

Specific binding of Hg 2+ to mismatched base pairs involving 5-hydroxyuracil in duplex DNA.
J.Inorg.Biochem. 241 pp.112125 - 112125 2023

Experiment:

 X-RAY DIFFRACTION Resolution:1.997Å R work:0.218R free:0.225

NDB ID:

 8CUC

PDB ID:

8CUC 

Release:

2023-05-24

Title:

Crystal structure analysis of SALL4 zinc finger domain in complex with DNA

Classification:

TRANSCRIPTION/DNA

Authors:

Seo, H.S., Dhe-Paganon, S.

Citation:

Crystal Structure Analysis of SALL4 Zinc Finger domain in complex with DNA
To Be Published pp. - 0

Experiment:

 X-RAY DIFFRACTION Resolution:2.09Å R work:0.202R free:0.23

NDB ID:

 8E5D

PDB ID:

8E5D 

Release:

2023-05-24

Title:

Crystal structure of double-stranded DNA deaminase toxin DddA in complex with DNA with the target cytosine parked in the major groove

Classification:

TOXIN/DNA

Authors:

Yin, L.L., Shi, K., Aihara, H.

Citation:

Structural basis of sequence-specific cytosine deamination by double-stranded DNA deaminase toxin DddA
To Be Published pp. - 0

Experiment:

 X-RAY DIFFRACTION Resolution:2.39Å R work:0.197R free:0.232

NDB ID:

 8E5E

PDB ID:

8E5E 

Release:

2023-05-24

Title:

Crystal structure of double-stranded DNA deaminase toxin DddA in complex with DNA with the target cytosine flipped into the active site

Classification:

TOXIN/DNA

Authors:

Yin, L.L., Shi, K., Aihara, H.

Citation:

Structural basis of sequence-specific cytosine deamination by double-stranded DNA deaminase toxin DddA
To Be Published pp. - 0

Experiment:

 X-RAY DIFFRACTION Resolution:2.62Å R work:0.241R free:0.257

NDB ID:

 8HTX

PDB ID:

8HTX 

Release:

2023-05-24

Title:

Crystal structure of BANP in complex with methylated DNA

Classification:

DNA BINDING PROTEIN

Authors:

Liu, K., Zhang, J., Xiao, Y., Yang, A., Song, X., Li, Y., Chen, Y., Hughes, T.R., Min, J.

Citation:

Structural insights into DNA recognition by the BEN domain of the transcription factor BANP.
J.Biol.Chem. 299 pp.104734 - 104734 2023

Experiment:

 X-RAY DIFFRACTION Resolution:2.8Å R work:0.232R free:0.272

NDB ID:

 7UV7

PDB ID:

7UV7 

Release:

2023-05-17

Title:

Isoreticular, interpenetrating co-crystal of Replication Initiator Protein REPE54 and scaffold duplex (21mer) containing the cognate REPE54 sequence and an insert duplex (10mer) with guest TAMRA-labelled thymine and T-A rich sequence.

Classification:

DNA BINDING PROTEIN/DNA

Authors:

Orun, A.R., Shields, E.T., Dmytriw, S., Vajapayajula, A., Snow, C.D.

Citation:

Designed crystalline assemblies of protein and DNA enable site-specific installation of a guest protein, DNA, and small molecule.
To Be Published pp. - 0

Experiment:

 X-RAY DIFFRACTION Resolution:3.02Å R work:0.231R free:0.268

NDB ID:

 7UXY

PDB ID:

7UXY 

Release:

2023-05-17

Title:

Isoreticular, interpenetrating co-crystal of protein variant Replication Initiator Protein REPE54 (L53G,Q54G,E55G) and symmetrical expanded duplex (31mer) containing the cognate REPE54 sequence and an additional G-C rich sequence.

Classification:

DNA BINDING PROTEIN/DNA

Authors:

Orun, A.R., Shields, E.T., Dmytriw, S., Vajapayajula, A., Snow, C.D.

Citation:

Designed crystalline assemblies of protein and DNA enable site-specific installation of a guest protein, DNA, and small molecule.
To Be Published pp. - 0

Experiment:

 X-RAY DIFFRACTION Resolution:3.15Å R work:0.246R free:0.264

NDB ID:

 7V0W

PDB ID:

7V0W 

Release:

2023-05-17

Title:

Structure of Ternary Complex of cGAS with dsDNA and Bound 5 -pppG(2,5 )pA

Classification:

Transferase/DNA

Authors:

Wu, S., Gabelli, S.B., Sohn, J.S.

Citation:

Structure of Ternary Complex of cGAS with dsDNA and Bound 5 -pppG(2 ,5 )pA
To Be Published pp. - 0

Experiment:

 X-RAY DIFFRACTION Resolution:2.66Å R work:0.199R free:0.238

NDB ID:

 8CRY

PDB ID:

8CRY 

Release:

2023-05-17

Title:

Crystal structure of alien DNA CTSZZPBSBSZPPBAG in an orthorhombic lattice

Classification:

DNA

Authors:

Georgiadis, M.M., Hoshika, S., Shukla, M., Benner, S.A.

Citation:

Alien DNA visualized at high resolution in A- and B-forms
To Be Published pp. - 0

Experiment:

 X-RAY DIFFRACTION Resolution:1.2Å R work:0.214R free:0.237

NDB ID:

 8CRZ

PDB ID:

8CRZ 

Release:

2023-05-17

Title:

Crystal structure of alien DNA CTSZZPBSBSZPPBAG in a tetragonal lattice

Classification:

DNA

Authors:

Georgiadis, M.M., Hoshika, S., Shukla, M., Benner, S.A.

Citation:

Alien DNA visualized at high resolution in A- and B-forms
To Be Published pp. - 0

Experiment:

 X-RAY DIFFRACTION Resolution:1.2Å R work:0.184R free:0.2

NDB ID:

 8CS0

PDB ID:

8CS0 

Release:

2023-05-17

Title:

Crystal structure of alien DNA CTSZZPBSBSZPPBAG in a host-guest complex with the N-terminal fragment of Moloney murine leukemia virus reverse transcriptase

Classification:

DNA BINDING PROTEIN/DNA

Authors:

Georgiadis, M.M., Hoshika, S., Shukla, M., Benner, S.A.

Citation:

Alien DNA visualized at high resolution in A- and B-forms
To Be Published pp. - 0

Experiment:

 X-RAY DIFFRACTION Resolution:1.65Å R work:0.208R free:0.243

NDB ID:

 8CYF

PDB ID:

8CYF 

Release:

2023-05-17

Title:

WhiB3 bound to SigmaAr4-RNAP Beta flap tip chimera and DNA

Classification:

TRANSCRIPTION/DNA/Transferase

Authors:

Wan, T., Horova, M., Khetrapal, V., Li, S., Jones, C., Schacht, A., Sun, X., Zhang, L.

Citation:

Structural Basis of DNA Binding by the WhiB-Like Transcription Factor WhiB3 in Mycobacterium tuberculosis.
J.Biol.Chem. pp.104777 - 104777 2023

Experiment:

 X-RAY DIFFRACTION Resolution:2.44Å R work:0.222R free:0.251

NDB ID:

 7MXQ

PDB ID:

7MXQ 

Release:

2023-05-10

Title:

Crystal structure of human exonuclease 1 Exo1 (WT) in complex with 5' recessed-end DNA (r-1)

Classification:

HYDROLASE/DNA

Authors:

Shi, Y., Hellinga, H.W., Beese, L.S.

Citation:

Structures of reaction intermediates reveal transient Mg2+-binding events that dynamically coordinate Human Exonuclease I activities
To Be Published pp. - 0

Experiment:

 X-RAY DIFFRACTION Resolution:3.23Å R work:0.203R free:0.248

NDB ID:

 7MXR

PDB ID:

7MXR 

Release:

2023-05-10

Title:

Crystal structure of human exonuclease 1 Exo1 (WT) in complex with 5' recessed-end DNA (r-2)

Classification:

HYDROLASE/DNA

Authors:

Shi, Y., Hellinga, H.W., Beese, L.S.

Citation:

Structures of reaction intermediates reveal transient Mg2+-binding events that dynamically coordinate Human Exonuclease I activities
To Be Published pp. - 0

Experiment:

 X-RAY DIFFRACTION Resolution:3.101Å R work:0.221R free:0.271

NDB ID:

 7MXS

PDB ID:

7MXS 

Release:

2023-05-10

Title:

Crystal structure of human exonuclease 1 Exo1 (WT) in complex with 5' recessed-end DNA (cr)

Classification:

HYDROLASE/DNA

Authors:

Shi, Y., Hellinga, H.W., Beese, L.S.

Citation:

Structures of reaction intermediates reveal transient Mg2+-binding events that dynamically coordinate Human Exonuclease I activities
To Be Published pp. - 0

Experiment:

 X-RAY DIFFRACTION Resolution:2.798Å R work:0.212R free:0.247

NDB ID:

 7MXT

PDB ID:

7MXT 

Release:

2023-05-10

Title:

Crystal structure of human exonuclease 1 Exo1 (WT) in complex with 5' recessed-end DNA (cmr)

Classification:

HYDROLASE/DNA

Authors:

Shi, Y., Hellinga, H.W., Beese, L.S.

Citation:

Structures of reaction intermediates reveal transient Mg2+-binding events that dynamically coordinate Human Exonuclease I activities
To Be Published pp. - 0

Experiment:

 X-RAY DIFFRACTION Resolution:3.048Å R work:0.21R free:0.259

NDB ID:

 7MXU

PDB ID:

7MXU 

Release:

2023-05-10

Title:

Crystal structure of human exonuclease 1 Exo1 (WT) in complex with 5' flap DNA (cf2)

Classification:

HYDROLASE/DNA

Authors:

Shi, Y., Hellinga, H.W., Beese, L.S.

Citation:

Structures of reaction intermediates reveal transient Mg2+-binding events that dynamically coordinate Human Exonuclease I activities
To Be Published pp. - 0

Experiment:

 X-RAY DIFFRACTION Resolution:3.042Å R work:0.229R free:0.268

NDB ID:

 7MXV

PDB ID:

7MXV 

Release:

2023-05-10

Title:

Crystal structure of human exonuclease 1 Exo1 (WT) in complex with 5' recessed-end DNA (ur)

Classification:

HYDROLASE/DNA

Authors:

Shi, Y., Hellinga, H.W., Beese, L.S.

Citation:

Structures of reaction intermediates reveal transient Mg2+-binding events that dynamically coordinate Human Exonuclease I activities
To Be Published pp. - 0

Experiment:

 X-RAY DIFFRACTION Resolution:2.211Å R work:0.22R free:0.244

NDB ID:

 7MXW

PDB ID:

7MXW 

Release:

2023-05-10

Title:

Crystal structure of human exonuclease 1 Exo1 (WT) in complex with 5' flap DNA (uf1)

Classification:

HYDROLASE/DNA

Authors:

Shi, Y., Hellinga, H.W., Beese, L.S.

Citation:

Structures of reaction intermediates reveal transient Mg2+-binding events that dynamically coordinate Human Exonuclease I activities
To Be Published pp. - 0

Experiment:

 X-RAY DIFFRACTION Resolution:2.836Å R work:0.219R free:0.265

NDB ID:

 7MXX

PDB ID:

7MXX 

Release:

2023-05-10

Title:

Crystal structure of human exonuclease 1 Exo1 (R92A) in complex with 5' flap DNA (uf4)

Classification:

HYDROLASE/DNA

Authors:

Shi, Y., Hellinga, H.W., Beese, L.S.

Citation:

Structures of reaction intermediates reveal transient Mg2+-binding events that dynamically coordinate Human Exonuclease I activities
To Be Published pp. - 0

Experiment:

 X-RAY DIFFRACTION Resolution:2.85Å R work:0.257R free:0.297

NDB ID:

 7UXW

PDB ID:

7UXW 

Release:

2023-05-10

Title:

Structure of ATP and GTP bind to Cyclic GMP AMP synthase (cGAS) through Mg coordination

Classification:

Transferase/DNA

Authors:

Wu, S., Gabelli, S.B., Sohn, J.S.

Citation:

ATP and GTP bind to Cyclic GMP AMP synthase (cGAS) through Mg coordination
To Be Published pp. - 0

Experiment:

 X-RAY DIFFRACTION Resolution:2.57Å R work:0.197R free:0.247

NDB ID:

 7UYN

PDB ID:

7UYN 

Release:

2023-05-10

Title:

Crystal structure of B-form alien DNA 5'-CTTBPPBBSSZZSAAG in a host-guest complex with the N-terminal fragment of Moloney murine leukemia virus reverse transcriptase

Classification:

DNA BINDING PROTEIN/DNA

Authors:

Georgiadis, M.M., Shukla, M., Hoshika, S., Benner, S.A.

Citation:

Crystal structures of B-form Alien DNA
To be Published pp. - 0

Experiment:

 X-RAY DIFFRACTION Resolution:1.65Å R work:0.222R free:0.246

NDB ID:

 7UYO

PDB ID:

7UYO 

Release:

2023-05-10

Title:

Crystal structure of B-form alien DNA 5'-CTTSSPBZPSZBBAAG in a host-guest complex with the N-terminal fragment of Moloney murine leukemia virus reverse transcriptase

Classification:

DNA BINDING PROTEIN/DNA

Authors:

Georgiadis, M.M., Shukla, M., Hoshika, S., Benner, S.A.

Citation:

Crystal structures of B-form alien DNA
To be Published pp. - 0

Experiment:

 X-RAY DIFFRACTION Resolution:1.65Å R work:0.226R free:0.256

NDB ID:

 7UYP

PDB ID:

7UYP 

Release:

2023-05-10

Title:

Crystal structure of B-form alien DNA 5'-CTTZZPBSBSZPPAAG in a host-guest complex with the N-terminal fragment of Moloney murine leukemia virus reverse transcriptase

Classification:

DNA BINDING PROTEIN/DNA

Authors:

Georgiadis, M.M.

Citation:

Crystal structures of B-form alien DNA
To be Published pp. - 0

Experiment:

 X-RAY DIFFRACTION Resolution:1.5Å R work:0.215R free:0.234

NDB ID:

 7UYQ

PDB ID:

7UYQ 

Release:

2023-05-10

Title:

Structure of GTP binds to Cyclic GMP AMP synthase (cGAS) through Mg coordination

Classification:

Transferase/DNA

Authors:

Wu, S., Gabelli, S.B., Sohn, J.S.

Citation:

Structure of GTP binds to Cyclic GMP AMP synthase (cGAS) through Mg coordination
To Be Published pp. - 0

Experiment:

 X-RAY DIFFRACTION Resolution:2.57Å R work:0.195R free:0.241

NDB ID:

 7UYZ

PDB ID:

7UYZ 

Release:

2023-05-10

Title:

Structure of Ternary Complex of cGAS with dsDNA and Bound 5 -pppG(2 ,5 )pG

Classification:

Transferase/DNA

Authors:

Wu, S., Gabelli, S.B., Sohn, J.S.

Citation:

Structure of Ternary Complex of cGAS with dsDNA and Bound 5 -pppG(2 ,5 )pG
To Be Published pp. - 0

Experiment:

 X-RAY DIFFRACTION Resolution:2.49Å R work:0.214R free:0.25

NDB ID:

 7UZR

PDB ID:

7UZR 

Release:

2023-05-10

Title:

Structure of Ternary Complex of cGAS with dsDNA and Bound 5 -pppG(2 ,5 )pG

Classification:

TRANSFERASE/DNA

Authors:

Wu, S., Gabelli, S.B., Sohn, J.S.

Citation:

Structure of Ternary Complex of cGAS with dsDNA and Bound 5 -pppG(2 ,5 )pG
To Be Published pp. - 0

Experiment:

 X-RAY DIFFRACTION Resolution:2.7Å R work:0.189R free:0.244

NDB ID:

 7V0C

PDB ID:

7V0C 

Release:

2023-05-10

Title:

Structure of Ternary Complex of cGAS with dsDNA and Bound 5 -pppG(2 ,5 )pG

Classification:

TRANSFERASE/DNA

Authors:

Wu, S., Gabelli, S.B., Sohn, J.S.

Citation:

Structure of Ternary Complex of cGAS with dsDNA and Bound 5 -pppG(2 ,5 )pG
To Be Published pp. - 0

Experiment:

 X-RAY DIFFRACTION Resolution:2.57Å R work:0.204R free:0.24

NDB ID:

 7V0R

PDB ID:

7V0R 

Release:

2023-05-10

Title:

Structure of Ternary Complex of cGAS with dsDNA and Bound 5 -ppcpG(2 ,5 )pA

Classification:

TRANSFERASE/DNA

Authors:

Wu, S., Gabelli, S.B., Sohn, J.S.

Citation:

Structure of Ternary Complex of cGAS with dsDNA and Bound 5 -ppcpG(2 ,5 )pA
To Be Published pp. - 0

Experiment:

 X-RAY DIFFRACTION Resolution:2.51Å R work:0.211R free:0.249

NDB ID:

 8DHC

PDB ID:

8DHC 

Release:

2023-05-10

Title:

Crystal structure of an i-motif from the HRAS promoter region

Classification:

DNA

Authors:

Li, K.S., Jordan, D., Lin, L.Y., McCarthy, S.E., Schneekloth Jr., J.S., Yatsunyk, L.A.

Citation:

Crystal Structure of an i-Motif from the HRAS Oncogene Promoter.
Angew.Chem.Int.Ed.Engl. pp.e202301666 - e202301666 2023

Experiment:

 X-RAY DIFFRACTION Resolution:2.02Å R work:0.252R free:0.254

NDB ID:

 8FHV

PDB ID:

8FHV 

Release:

2023-05-10

Title:

Structure of Lettuce aptamer bound to DFHBI-1T with thallium I ions

Classification:

DNA

Authors:

Passalacqua, L.F.M., Ferre-D'Amare, A.R.

Citation:

Structure of Lettuce aptamer bound to DFHBI-1T with thallium I ions
To Be Published pp. - 0

Experiment:

 X-RAY DIFFRACTION Resolution:2.5Å R work:0.211R free:0.25

NDB ID:

 8FHX

PDB ID:

8FHX 

Release:

2023-05-10

Title:

Structure of Lettuce aptamer bound to DFHBI-1T

Classification:

DNA

Authors:

Passalacqua, L.F.M., Ferre-D'Amare, A.R.

Citation:

Structure of Lettuce aptamer bound to DFHBI-1T
To Be Published pp. - 0

Experiment:

 X-RAY DIFFRACTION Resolution:2.5Å R work:0.224R free:0.268

NDB ID:

 8FHZ

PDB ID:

8FHZ 

Release:

2023-05-10

Title:

Structure of Lettuce aptamer bound to DFHO

Classification:

DNA

Authors:

Passalacqua, L.F.M., Ferre-D'Amare, A.R.

Citation:

Structure of Lettuce aptamer bound to DFHO
To Be Published pp. - 0

Experiment:

 X-RAY DIFFRACTION Resolution:2.6Å R work:0.214R free:0.264

NDB ID:

 8FI0

PDB ID:

8FI0 

Release:

2023-05-10

Title:

Structure of Lettuce aptamer bound to DFAME

Classification:

DNA

Authors:

Passalacqua, L.F.M., Ferre-D'Amare, A.R.

Citation:

Structure of Lettuce aptamer bound to DFAME
To Be Published pp. - 0

Experiment:

 X-RAY DIFFRACTION Resolution:3.0Å R work:0.228R free:0.291

NDB ID:

 8FI1

PDB ID:

8FI1 

Release:

2023-05-10

Title:

Structure of Lettuce C20G bound to DFHO

Classification:

DNA

Authors:

Passalacqua, L.F.M., Ferre-D'Amare, A.R.

Citation:

Structure of Lettuce C20G bound to DFHO
To Be Published pp. - 0

Experiment:

 X-RAY DIFFRACTION Resolution:2.6Å R work:0.218R free:0.27

NDB ID:

 8FI2

PDB ID:

8FI2 

Release:

2023-05-10

Title:

Structure of Lettuce C20T bound to DFHBI-1T

Classification:

DNA

Authors:

Passalacqua, L.F.M., Ferre-D'Amare, A.R.

Citation:

Structure of Lettuce C20T bound to DFHBI-1T
To Be Published pp. - 0

Experiment:

 X-RAY DIFFRACTION Resolution:3.0Å R work:0.244R free:0.287

NDB ID:

 8FI7

PDB ID:

8FI7 

Release:

2023-05-10

Title:

Structure of Lettuce C20T bound to DFHO

Classification:

DNA

Authors:

Passalacqua, L.F.M., Ferre-D'Amare, A.R.

Citation:

Structure of Lettuce C20T bound to DFHO
To Be Published pp. - 0

Experiment:

 X-RAY DIFFRACTION Resolution:2.9Å R work:0.244R free:0.289

NDB ID:

 8FI8

PDB ID:

8FI8 

Release:

2023-05-10

Title:

Structure of Lettuce C20T bound to DFAME

Classification:

DNA

Authors:

Passalacqua, L.F.M., Ferre-D'Amare, A.R.

Citation:

Structure of Lettuce C20T bound to DFAME
To Be Published pp. - 0

Experiment:

 X-RAY DIFFRACTION Resolution:2.8Å R work:0.216R free:0.282

NDB ID:

 8FS1

PDB ID:

8FS1 

Release:

2023-05-10

Title:

CamA Adenine Methyltransferase Complexed to Cognate Substrate DNA and Inhibitor 11a (YD905)

Classification:

TRANSFERASE/DNA/INHIBITOR

Authors:

Zhou, J., Deng, Y., Iyamu, I.D., Horton, J.R., Yu, D., Hajian, T., Vedadi, M., Rotili, D., Mai, A., Blumenthal, R.M., Zhang, X., Huang, R., Cheng, X.

Citation:

Comparative Study of Adenosine Analogs as Inhibitors of Protein Arginine Methyltransferases and a Clostridioides difficile- Specific DNA Adenine Methyltransferase.
Acs Chem.Biol. 18 pp.734 - 745 2023

Experiment:

 X-RAY DIFFRACTION Resolution:2.74Å R work:0.171R free:0.217

NDB ID:

 8FS2

PDB ID:

8FS2 

Release:

2023-05-10

Title:

CamA Adenine Methyltransferase Complexed to Cognate Substrate DNA and Inhibitor 11b (YD907)

Classification:

TRANSFERASE/DNA/INHIBITOR

Authors:

Zhou, J., Deng, Y., Iyamu, I.D., Horton, J.R., Yu, D., Hajian, T., Vedadi, M., Rotili, D., Mai, A., Blumenthal, R.M., Zhang, X., Huang, R., Cheng, X.

Citation:

Comparative Study of Adenosine Analogs as Inhibitors of Protein Arginine Methyltransferases and a Clostridioides difficile- Specific DNA Adenine Methyltransferase.
Acs Chem.Biol. 18 pp.734 - 745 2023

Experiment:

 X-RAY DIFFRACTION Resolution:2.59Å R work:0.173R free:0.206

NDB ID:

 8G4G

PDB ID:

8G4G 

Release:

2023-05-10

Title:

Crystal Engineering with One 8-mer DNA

Classification:

DNA

Authors:

Zhao, J., Zhang, C., Lu, B., Sha, R., Noinaj, N., Mao, C.

Citation:

Divergence and Convergence: Complexity Emerges in Crystal Engineering from an 8-mer DNA.
J.Am.Chem.Soc. 145 pp.10475 - 10479 2023

Experiment:

 X-RAY DIFFRACTION Resolution:2.17Å R work:0.25R free:0.26

NDB ID:

 7UTT

PDB ID:

7UTT 

Release:

2023-05-03

Title:

Structure of Non-hydrolyzable ATP (ApCpp) binds to Cyclic GMP AMP synthase (cGAS) through Mn coordination

Classification:

Transferase/DNA

Authors:

Wu, S., Gabelli, S.B., Sohn, J.S.

Citation:

Structure of Non-hydrolyzable ATP (ApCpp) binds to Cyclic GMP AMP synthase (cGAS) through Mn coordination
To Be Published pp. - 0

Experiment:

 X-RAY DIFFRACTION Resolution:2.04Å R work:0.181R free:0.21

NDB ID:

 7UUX

PDB ID:

7UUX 

Release:

2023-05-03

Title:

ATP binds to Cyclic GMP AMP synthase (cGAS) through Mg coordination

Classification:

Transferase/DNA

Authors:

Wu, S., Gabelli, S.B., Sohn, J.S.

Citation:

ATP binds to Cyclic GMP AMP synthase (cGAS) through Mg coordination
To Be Published pp. - 0

Experiment:

 X-RAY DIFFRACTION Resolution:2.26Å R work:0.2R free:0.233

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