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As of 21-Aug-2019 number of released structures: 10343
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Polymer Type: All + Protein Function: All + Structural Features: All + Experimental Method: All

Results: 6998  Download results as an excel file       Gallery view

NDB ID:

6DG0

PDB ID:

6DG0 

Release:

2019-08-21

Title:

MEC-8 C-terminal RRM domain bound to AGCACA

Classification:

RNA BINDING PROTEIN/DNA

Authors:

Soufari, H., Mackereth, C.D.

Citation:

Structure of MEC-8 RRM2 in complex with AGCACA
To Be Published pp. - 0

Experiment:

X-RAY DIFFRACTION Resolution:2.457Å R work:0.234R free:0.287

NDB ID:

6Q2B

PDB ID:

6Q2B 

Release:

2019-08-21

Title:

Crystal Structure of Putative MarR Family Transcriptional Regulator from Listeria monocytogenes complexed with 26mer DNA

Classification:

TRANSCRIPTION

Authors:

Kim, Y., Tesar, C., Clancy, S., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)

Citation:

Crystal Structure of Putative MarR Family Transcriptional Regulator from Listeria monocytogenes complexed with 26mer DNA.
To Be Published pp. - 0

Experiment:

X-RAY DIFFRACTION Resolution:2.72Å R work:0.232R free:0.251

NDB ID:

6ED9

PDB ID:

6ED9 

Release:

2019-08-14

Title:

NMR structure for Sp1 transcription factor duplex 5'-d(TGGGCGGGA)

Classification:

DNA

Authors:

Davis, E.V., Hennig, M., Arya, D.P.

Citation:

An NMR Structure Determination and Analysis of Four Sp1 Consensus Sequences
To Be Published pp. - 0

Experiment:

SOLUTION NMR

NDB ID:

6PY8

PDB ID:

6PY8 

Release:

2019-08-14

Title:

Crystal structure of the RBPJ-NOTCH1-NRARP ternary complex bound to DNA

Classification:

DNA BINDING PROTEIN/DNA

Authors:

Jarrett, S.M., Seegar, T.C.M., Andrews, M., Adelmant, G., Marto, J.A., Aster, J.C., Blacklow, S.C.

Citation:

Molecular basis for feedback inhibition of Notch signaling by the Notch regulated ankyrin repeat protein NRARP
To Be Published pp. - 0

Experiment:

X-RAY DIFFRACTION Resolution:3.754Å R work:0.266R free:0.314

NDB ID:

6KIJ

PDB ID:

6KIJ 

Release:

2019-08-07

Title:

Crystal structure of yedK with ssDNA containing an abasic site

Classification:

DNA BINDING PROTEIN

Authors:

Wang, N., Bao, H., Huang, H.

Citation:

Crystal structure of yedK
To Be Published pp. - 0

Experiment:

X-RAY DIFFRACTION Resolution:1.58Å R work:0.151R free:0.182

NDB ID:

6H0S

PDB ID:

6H0S 

Release:

2019-07-31

Title:

Crystal structure of the complex between the Lactococcus lactis FPG mutant G226P and a Fapy-dG containing DNA

Classification:

HYDROLASE

Authors:

Coste, F., Castaing, B., Carell, T.

Citation:

Crystal structure of the complex between the Lactococcus lactis FPG mutant G226P and a Fapy-dG containing DNA
To Be Published pp. - 0

Experiment:

X-RAY DIFFRACTION Resolution:1.75Å R work:0.156R free:0.177

NDB ID:

6IOD

PDB ID:

6IOD 

Release:

2019-07-31

Title:

The structure of UdgX in complex with single-stranded DNA

Classification:

DNA BINDING PROTEIN/DNA

Authors:

Tu, J., Chen, R., Yang, Y., Cao, W., Xie, W.

Citation:

Suicide inactivation of the uracil DNA glycosylase UdgX by covalent complex formation.
Nat.Chem.Biol. 15 pp.615 - 622 2019

Experiment:

X-RAY DIFFRACTION Resolution:1.66Å R work:0.182R free:0.216

NDB ID:

6JRP

PDB ID:

6JRP 

Release:

2019-07-31

Title:

Crystal structure of CIC-HMG-ETV5-DNA complex

Classification:

TRANSCRIPTION

Authors:

Lee, H., Song, J.J.

Citation:

The crystal structure of Capicua HMG-box domain complexed with the ETV5-DNA and its implications for Capicua-mediated cancers.
Febs J. pp. - 2019

Experiment:

X-RAY DIFFRACTION Resolution:3.0Å R work:0.296R free:0.334

NDB ID:

6JV3

PDB ID:

6JV3 

Release:

2019-07-31

Title:

Crystal structure of 5-hydoxylmethylcytosine containing decamer dsDNA

Classification:

DNA

Authors:

Fu, T., Liu, L., Yang, Q.L., Wang, Y., Xu, P., Zhang, L., Liu, S., Dai, Q., Ji, Q., Xu, G.L., He, C., Luo, C., Zhang, L.

Citation:

Thymine DNA glycosylase recognizes the geometry alteration of minor grooves induced by 5-formylcytosine and 5-carboxylcytosine
Chem Sci pp. - 2019

Experiment:

X-RAY DIFFRACTION Resolution:2.851Å R work:0.228R free:0.282

NDB ID:

6JV5

PDB ID:

6JV5 

Release:

2019-07-31

Title:

Crystal structure of 5-methylcytosine containing decamer dsDNA

Classification:

DNA

Authors:

Fu, T., Liu, L., Yang, Q.L., Wang, Y., Xu, P., Zhang, L., Liu, S., Dai, Q., Ji, Q., Xu, G.L., He, C., Luo, C., Zhang, L.

Citation:

Thymine DNA glycosylase recognizes the geometry alteration of minor grooves induced by 5-formylcytosine and 5-carboxylcytosine
Chem Sci pp. - 2019

Experiment:

X-RAY DIFFRACTION Resolution:1.401Å R work:0.18R free:0.216

NDB ID:

6O71

PDB ID:

6O71 

Release:

2019-07-31

Title:

Crystal structure of Csm6 in complex with cdA4 by soaking cdA4 into Csm6

Classification:

immune system/dna

Authors:

Jia, N., Jones, R., Yang, G., Ouerfelli, O., Patel, D.J.

Citation:

CRISPR-Cas III-A Csm6 CARF Domain Is a Ring Nuclease Triggering Stepwise cA4Cleavage with ApA>p Formation Terminating RNase Activity.
Mol.Cell pp. - 2019

Experiment:

X-RAY DIFFRACTION Resolution:2.55Å R work:0.224R free:0.273

NDB ID:

6J0H

PDB ID:

6J0H 

Release:

2019-07-24

Title:

Crystal structure of Actinomycin D- d(TTGGCGAA) complex

Classification:

DNA/ANTIBIOTIC

Authors:

Satange, R., Chuang, C.Y., Neidle, S., Hou, M.H.

Citation:

Polymorphic G:G mismatches act as hotspots for inducing right-handed Z DNA by DNA intercalation.
Nucleic Acids Res. pp. - 2019

Experiment:

X-RAY DIFFRACTION Resolution:1.52Å R work:0.209R free:0.215

NDB ID:

6J0I

PDB ID:

6J0I 

Release:

2019-07-24

Title:

Structure of [Co2+-(Chromomycin A3)2]-d(TTGGCGAA)2 complex

Classification:

DNA/ANTIBIOTIC

Authors:

Satange, R., Chuang, C.Y., Neidle, S., Hou, M.H.

Citation:

Polymorphic G:G mismatches act as hotspots for inducing right-handed Z DNA by DNA intercalation.
Nucleic Acids Res. pp. - 2019

Experiment:

X-RAY DIFFRACTION Resolution:2.5Å R work:0.256R free:0.289

NDB ID:

6JBX

PDB ID:

6JBX 

Release:

2019-07-24

Title:

Crystal structure of Streptococcus pneumoniae FabT in complex with DNA

Classification:

TRANSCRIPTION/DNA

Authors:

Zuo, G., Chen, Z.P., Jiang, Y.L., Zhu, Z., Ding, C., Zhang, Z., Chen, Y., Zhou, C.Z., Li, Q.

Citation:

Structural insights into repression of the Pneumococcal fatty acid synthesis pathway by repressor FabT and co-repressor acyl-ACP.
Febs Lett. pp. - 2019

Experiment:

X-RAY DIFFRACTION Resolution:2.2Å R work:0.187R free:0.22

NDB ID:

6MII

PDB ID:

6MII 

Release:

2019-07-24

Title:

Crystal structure of minichromosome maintenance protein MCM/DNA complex

Classification:

HYDROLASE/DNA

Authors:

Meagher, M., Epling, L.B., Enemark, E.J.

Citation:

DNA translocation mechanism of the MCM complex and implications for replication initiation.
Nat Commun 10 pp.3117 - 3117 2019

Experiment:

X-RAY DIFFRACTION Resolution:3.15Å R work:0.188R free:0.241

NDB ID:

6OR7

PDB ID:

6OR7 

Release:

2019-07-24

Title:

Structure of HIV-1 Reverse Transcriptase (RT) in complex with DNA AND (-)FTC-TP

Classification:

TRANSFERASE/DNA

Authors:

Bertoletti, N., Chan, A.H., Schinazi, R.F., Yin, Y.W., Anderson, K.S.

Citation:

Structural insights into the recognition of nucleoside reverse transcriptase inhibitors by HIV-1 reverse transcriptase: First crystal structures with reverse transcriptase and the active triphosphate forms of lamivudine and emtricitabine.
Protein Sci. pp. - 2019

Experiment:

X-RAY DIFFRACTION Resolution:2.53Å R work:0.211R free:0.249

NDB ID:

6OTZ

PDB ID:

6OTZ 

Release:

2019-07-24

Title:

Structure of HIV-1 Reverse Transcriptase (RT) in complex with dsDNA and (+)FTC-TP

Classification:

TRANSFERASE/DNA

Authors:

Bertoletti, N., Chan, A.H., Schinazi, R.F., Yin, Y.W., Anderson, K.S.

Citation:

Structural insights into the recognition of nucleoside reverse transcriptase inhibitors by HIV-1 reverse transcriptase: First crystal structures with reverse transcriptase and the active triphosphate forms of lamivudine and emtricitabine.
Protein Sci. pp. - 2019

Experiment:

X-RAY DIFFRACTION Resolution:2.857Å R work:0.198R free:0.24

NDB ID:

6OUN

PDB ID:

6OUN 

Release:

2019-07-24

Title:

Structure of HIV-1 Reverse Transcriptase (RT) in complex with dsDNA and (-)3TC-TP

Classification:

TRANSFERASE/DNA

Authors:

Bertoletti, N., Chan, A.H., Schinazi, R.F., Yin, Y.W., Anderson, K.S.

Citation:

Structural insights into the recognition of nucleoside reverse transcriptase inhibitors by HIV-1 reverse transcriptase: First crystal structures with reverse transcriptase and the active triphosphate forms of lamivudine and emtricitabine.
Protein Sci. pp. - 2019

Experiment:

X-RAY DIFFRACTION Resolution:2.656Å R work:0.207R free:0.259

NDB ID:

6OVR

PDB ID:

6OVR 

Release:

2019-07-24

Title:

X-ray crystal structure of a bacterial reiterative transcription complex of pyrG promoter variant -1G

Classification:

TRANSCRIPTION/DNA/RNA

Authors:

Murakami, K.S., Shin, Y.

Citation:

Structural basis of reiterative transcription from the pyrG promoter
To Be Published pp. - 0

Experiment:

X-RAY DIFFRACTION Resolution:2.843Å R work:0.221R free:0.268

NDB ID:

6OVY

PDB ID:

6OVY 

Release:

2019-07-24

Title:

X-ray crystal structure of a bacterial reiterative transcription complex of pyrG promoter variant -1C

Classification:

TRANSCRIPTION/DNA/RNA

Authors:

Murakami, K.S., Shin, Y.

Citation:

Structural basis of reiterative transcription from the pyrG promoter
To Be Published pp. - 0

Experiment:

X-RAY DIFFRACTION Resolution:2.999Å R work:0.212R free:0.236

NDB ID:

6OW3

PDB ID:

6OW3 

Release:

2019-07-24

Title:

X-ray crystal structure of a bacterial reiterative transcription complex of pyrG promoter variant -1T

Classification:

TRANSCRIPTION/DNA/RNA

Authors:

Murakami, K.S., Shin, Y.

Citation:

Structural basis of reiterative transcription from the pyrG promoter
To Be Published pp. - 0

Experiment:

X-RAY DIFFRACTION Resolution:2.766Å R work:0.217R free:0.254

NDB ID:

6OY7

PDB ID:

6OY7 

Release:

2019-07-24

Title:

X-ray crystal structure of a bacterial reiterative transcription complex of pyrG promoter at 7 min

Classification:

TRANSCRIPTION/DNA/RNA

Authors:

Shin, Y., Murakami, K.S.

Citation:

Structural basis of reiterative transcription from the pyrG promoter
To Be Published pp. - 0

Experiment:

X-RAY DIFFRACTION Resolution:3.04Å R work:0.207R free:0.247

NDB ID:

6P1I

PDB ID:

6P1I 

Release:

2019-07-24

Title:

Structure of HIV-1 Reverse Transcriptase (RT) in complex with dsDNA and dCTP

Classification:

TRANSFERASE/DNA

Authors:

Bertoletti, N., Chan, A.H., Schinazi, R.F., Yin, Y.W., Anderson, K.S.

Citation:

Structural insights into the recognition of nucleoside reverse transcriptase inhibitors by HIV-1 reverse transcriptase: First crystal structures with reverse transcriptase and the active triphosphate forms of lamivudine and emtricitabine.
Protein Sci. pp. - 2019

Experiment:

X-RAY DIFFRACTION Resolution:2.74Å R work:0.182R free:0.236

NDB ID:

6P1X

PDB ID:

6P1X 

Release:

2019-07-24

Title:

Structure of HIV-1 Reverse Transcriptase (RT) in complex with dsDNA and L-ddCTP

Classification:

TRANSFERASE/DNA

Authors:

Bertoletti, N., Chan, A.H., Schinazi, R.F., Yin, Y.W., Anderson, K.S.

Citation:

Structural insights into the recognition of nucleoside reverse transcriptase inhibitors by HIV-1 reverse transcriptase: First crystal structures with reverse transcriptase and the active triphosphate forms of lamivudine and emtricitabine.
Protein Sci. pp. - 2019

Experiment:

X-RAY DIFFRACTION Resolution:2.553Å R work:0.187R free:0.23

NDB ID:

6P2G

PDB ID:

6P2G 

Release:

2019-07-24

Title:

Structure of HIV-1 Reverse Transcriptase (RT) in complex with dsDNA and D-ddCTP

Classification:

TRANSFERASE/DNA

Authors:

Bertoletti, N., Chan, A.H., Schinazi, R.F., Yin, Y.W., Anderson, K.S.

Citation:

Structural insights into the recognition of nucleoside reverse transcriptase inhibitors by HIV-1 reverse transcriptase: First crystal structures with reverse transcriptase and the active triphosphate forms of lamivudine and emtricitabine.
Protein Sci. pp. - 2019

Experiment:

X-RAY DIFFRACTION Resolution:2.99Å R work:0.215R free:0.267

NDB ID:

6P71

PDB ID:

6P71 

Release:

2019-07-24

Title:

X-ray crystal structure of a bacterial reiterative transcription complex of pyrBI promoter

Classification:

TRANSCRIPTION/DNA/RNA

Authors:

Shin, Y., Murakami, K.S.

Citation:

Structural basis of reiterative transcription from the pyrG promoter
To Be Published pp. - 0

Experiment:

X-RAY DIFFRACTION Resolution:2.92Å R work:0.21R free:0.248

NDB ID:

6QT1

PDB ID:

6QT1 

Release:

2019-07-17

Title:

Radiation damage study on a 16mer DNA segment, structure at 0.48 MGy dose

Classification:

DNA

Authors:

Bugris, V., Harmat, V., Ferenc, G., Brockhauser, S., Carmichael, I., Garman, E.F.

Citation:

Radiation-damage investigation of a DNA 16-mer.
J.Synchrotron Radiat. 26 pp.998 - 1009 2019

Experiment:

X-RAY DIFFRACTION Resolution:1.8Å R work:0.219R free:0.255

NDB ID:

6QT2

PDB ID:

6QT2 

Release:

2019-07-17

Title:

Radiation damage study on a 16mer DNA segment, structure at 6.2 MGy dose

Classification:

DNA

Authors:

Bugris, V., Harmat, V., Ferenc, G., Brockhauser, S., Carmichael, I., Garman, E.F.

Citation:

Radiation-damage investigation of a DNA 16-mer.
J.Synchrotron Radiat. 26 pp.998 - 1009 2019

Experiment:

X-RAY DIFFRACTION Resolution:1.8Å R work:0.219R free:0.281

NDB ID:

6QT3

PDB ID:

6QT3 

Release:

2019-07-17

Title:

Radiation damage study on a 16mer DNA segment, structure at 12.0 MGy dose

Classification:

DNA

Authors:

Bugris, V., Harmat, V., Ferenc, G., Brockhauser, S., Carmichael, I., Garman, E.F.

Citation:

Radiation-damage investigation of a DNA 16-mer.
J.Synchrotron Radiat. 26 pp.998 - 1009 2019

Experiment:

X-RAY DIFFRACTION Resolution:1.8Å R work:0.222R free:0.291

NDB ID:

6QT4

PDB ID:

6QT4 

Release:

2019-07-17

Title:

Radiation damage study on a 16mer DNA segment, structure at 17.7 MGy dose

Classification:

DNA

Authors:

Bugris, V., Harmat, V., Ferenc, G., Brockhauser, S., Carmichael, I., Garman, E.F.

Citation:

Radiation-damage investigation of a DNA 16-mer.
J.Synchrotron Radiat. 26 pp.998 - 1009 2019

Experiment:

X-RAY DIFFRACTION Resolution:1.8Å R work:0.231R free:0.31

NDB ID:

6QT5

PDB ID:

6QT5 

Release:

2019-07-17

Title:

Radiation damage study on a 16mer DNA segment, structure at 63.7 MGy dose

Classification:

DNA

Authors:

Bugris, V., Harmat, V., Ferenc, G., Brockhauser, S., Carmichael, I., Garman, E.F.

Citation:

Radiation-damage investigation of a DNA 16-mer.
J.Synchrotron Radiat. 26 pp.998 - 1009 2019

Experiment:

X-RAY DIFFRACTION Resolution:1.8Å R work:0.247R free:0.344

NDB ID:

6QT6

PDB ID:

6QT6 

Release:

2019-07-17

Title:

Radiation damage study on a 16mer DNA segment, structure at 29.2 MGy dose

Classification:

DNA

Authors:

Bugris, V., Harmat, V., Ferenc, G., Brockhauser, S., Carmichael, I., Garman, E.F.

Citation:

Radiation-damage investigation of a DNA 16-mer.
J.Synchrotron Radiat. 26 pp.998 - 1009 2019

Experiment:

X-RAY DIFFRACTION Resolution:1.8Å R work:0.27R free:0.369

NDB ID:

6FM4

PDB ID:

6FM4 

Release:

2019-07-10

Title:

The crystal structure of S. aureus Gyrase complex with ID-130 and DNA

Classification:

ISOMERASE

Authors:

Magaro, G., Prati, F., Garofalo, B., Corso, G., Furlotti, G., Apicella, C., Mangano, G., D'Atanasio, N., Robinson, D., Di Giorgio, F.P., Ombrato, R.

Citation:

Virtual Screening Approach and Investigation of Structure-Activity Relationships To Discover Novel Bacterial Topoisomerase Inhibitors Targeting Gram-Positive and Gram-Negative Pathogens.
J.Med.Chem. pp. - 2019

Experiment:

X-RAY DIFFRACTION Resolution:2.7Å R work:0.224R free:0.299

NDB ID:

6GY3

PDB ID:

6GY3 

Release:

2019-07-10

Title:

Crystal Structure of C. glutamicum AmtR bound to glnA operator DNA

Classification:

TRANSCRIPTION

Authors:

Schwab, C., Sevvana, M., Seidel, G., Sandmann, A., Grau, F.C., Muller, Y.A.

Citation:

The role of DNA flexibility in transcription regulator AmtR-DNA interaction
To be published pp. - 0

Experiment:

X-RAY DIFFRACTION Resolution:2.68Å R work:0.208R free:0.25

NDB ID:

6JCE

PDB ID:

6JCE 

Release:

2019-07-10

Title:

NMR solution and X-ray crystal structures of a DNA containing both right-and left-handed parallel-stranded G-quadruplexes

Classification:

DNA

Authors:

Winnerdy, F.R., Bakalar, B., Maity, A., Vandana, J.J., Mechulam, Y., Schmitt, E., Phan, A.T.

Citation:

NMR solution and X-ray crystal structures of a DNA molecule containing both right- and left-handed parallel-stranded G-quadruplexes.
Nucleic Acids Res. pp. - 2019

Experiment:

SOLUTION NMR

NDB ID:

6KBS

PDB ID:

6KBS 

Release:

2019-07-10

Title:

Crystal structure of yedK in complex with ssDNA

Classification:

DNA BINDING PROTEIN

Authors:

Wang, N., Bao, H., Huang, H.

Citation:

Crystal structure of yedK in complex with ssDNA
To Be Published pp. - 0

Experiment:

X-RAY DIFFRACTION Resolution:1.601Å R work:0.172R free:0.2

NDB ID:

6KBX

PDB ID:

6KBX 

Release:

2019-07-10

Title:

Crystal structure of yedK in complex with ssDNA containing abasic site

Classification:

DNA BINDING PROTEIN

Authors:

Wang, N., Bao, H., Huang, H.

Citation:

Crystal structure of yedK in complex with ssDNA containing abasic site
To Be Published pp. - 0

Experiment:

X-RAY DIFFRACTION Resolution:1.221Å R work:0.155R free:0.164

NDB ID:

6KBZ

PDB ID:

6KBZ 

Release:

2019-07-10

Title:

Crystal structure of yedK with ssDNA containing a tetrahydrofuran abasic site

Classification:

DNA BINDING PROTEIN

Authors:

Wang, N., Bao, H., Huang, H.

Citation:

Crystal structure of yedK
To Be Published pp. - 0

Experiment:

X-RAY DIFFRACTION Resolution:1.653Å R work:0.159R free:0.196

NDB ID:

6KCQ

PDB ID:

6KCQ 

Release:

2019-07-10

Title:

Crystal structure of yedK with ssDNA containing an abasic site

Classification:

DNA BINDING PROTEIN

Authors:

Wang, N., Bao, H., Huang, H.

Citation:

Crystal structure of yedK
To Be Published pp. - 0

Experiment:

X-RAY DIFFRACTION Resolution:1.701Å R work:0.16R free:0.203

NDB ID:

6OM3

PDB ID:

6OM3 

Release:

2019-07-10

Title:

Crystal structure of the Orc1 BAH domain in complex with a nucleosome core particle

Classification:

Structural Protein/DNA

Authors:

De Ioannes, P., Leon, V.A., Kuang, Z., Wang, M., Boeke, J.D., Hochwagen, A., Armache, K.J.

Citation:

Structure and function of the Orc1 BAH-nucleosome complex.
Nat Commun 10 pp.2894 - 2894 2019

Experiment:

X-RAY DIFFRACTION Resolution:3.3Å R work:0.212R free:0.249

NDB ID:

6QFD

PDB ID:

6QFD 

Release:

2019-07-10

Title:

The complex structure of hsRosR-S4 (vng0258/RosR-S4)

Classification:

DNA BINDING PROTEIN

Authors:

Kutnowski, N., Shmulevich, F., Davidov, G., Shahar, A., Bar-Zvi, D., Eichler, J., Zarivach, R., Shaanan, B.

Citation:

Specificity of protein-DNA interactions in hypersaline environment: structural studies on complexes of Halobacterium salinarum oxidative stress-dependent protein hsRosR.
Nucleic Acids Res. pp. - 2019

Experiment:

X-RAY DIFFRACTION Resolution:2.133Å R work:0.209R free:0.231

NDB ID:

6QH0

PDB ID:

6QH0 

Release:

2019-07-10

Title:

The complex structure of hsRosR-S5 (VNG0258H/RosR-S5)

Classification:

DNA BINDING PROTEIN

Authors:

Kutnowski, N., Shmulevich, F., Davidov, G., Shahar, A., Bar-Zvi, D., Eichler, J., Zarivach, R., Shaanan, B.

Citation:

Specificity of protein-DNA interactions in hypersaline environment: structural studies on complexes of Halobacterium salinarum oxidative stress-dependent protein hsRosR.
Nucleic Acids Res. pp. - 2019

Experiment:

X-RAY DIFFRACTION Resolution:2.436Å R work:0.239R free:0.267

NDB ID:

6QIL

PDB ID:

6QIL 

Release:

2019-07-10

Title:

The complex structure of hsRosR-S1 (VNG0258H/RosR-S1)

Classification:

DNA BINDING PROTEIN

Authors:

Kutnowski, N., Shmulevich, F., Davidov, G., Shahar, A., Bar-Zvi, D., Eichler, J., Zarivach, R., Shaanan, B.

Citation:

Specificity of protein-DNA interactions in hypersaline environment: structural studies on complexes of Halobacterium salinarum oxidative stress-dependent protein hsRosR.
Nucleic Acids Res. pp. - 2019

Experiment:

X-RAY DIFFRACTION Resolution:2.0Å R work:0.207R free:0.234

NDB ID:

6QUA

PDB ID:

6QUA 

Release:

2019-07-10

Title:

The complex structure of hsRosR-SG (vng0258/RosR-SG)

Classification:

DNA BINDING PROTEIN

Authors:

Kutnowski, N., Shmulevich, F., Davidov, G., Shahar, A., Bar-Zvi, D., Eichler, J., Zarivach, R., Shaanan, B.

Citation:

Specificity of protein-DNA interactions in hypersaline environment: structural studies on complexes of Halobacterium salinarum oxidative stress-dependent protein hsRosR.
Nucleic Acids Res. pp. - 2019

Experiment:

X-RAY DIFFRACTION Resolution:2.681Å R work:0.238R free:0.289

NDB ID:

6RAR

PDB ID:

6RAR 

Release:

2019-07-10

Title:

Pmar-Lig_PreS3-Mn

Classification:

DNA BINDING PROTEIN

Authors:

Williamson, A., Leiros, H.K.S.

Citation:

Structure of a novel ATP-dependent DNA ligase from Prochlorococcus marinus
To be published pp. - 0

Experiment:

X-RAY DIFFRACTION Resolution:1.785Å R work:0.232R free:0.263

NDB ID:

6RAS

PDB ID:

6RAS 

Release:

2019-07-10

Title:

Pmar-Lig_Pre.

Classification:

DNA BINDING PROTEIN

Authors:

Williamson, A., Leiros, H.K.S.

Citation:

Structure of a novel ATP-dependent DNA ligase from Prochlorococcus marinus
To be published pp. - 0

Experiment:

X-RAY DIFFRACTION Resolution:2.75Å R work:0.187R free:0.241

NDB ID:

6RAU

PDB ID:

6RAU 

Release:

2019-07-10

Title:

PostS3_Pmar_lig4_WT

Classification:

DNA BINDING PROTEIN

Authors:

Williamson, A., Leiros, H.K.S.

Citation:

Structure of a novel ATP-dependent DNA ligase from Prochlorococcus marinus
To be published pp. - 0

Experiment:

X-RAY DIFFRACTION Resolution:1.99Å R work:0.193R free:0.23

NDB ID:

6RCE

PDB ID:

6RCE 

Release:

2019-07-10

Title:

Pmar-Lig_PreS3

Classification:

DNA BINDING PROTEIN

Authors:

Williamson, A., Leiros, H.K.S.

Citation:

Structure of a novel ATP-dependent DNA ligase from Prochlorococcus marinus
To be published pp. - 0

Experiment:

X-RAY DIFFRACTION Resolution:1.946Å R work:0.229R free:0.271

NDB ID:

6DVT

PDB ID:

6DVT 

Release:

2019-07-03

Title:

NMR structure for Sp1 transcription factor duplex 5'-d(GGGGCGGGA)

Classification:

DNA

Authors:

Davis, E.V., Hennig, M., Arya, D.P.

Citation:

An NMR Structure Determination and Analysis of Four Sp1 Consensus Sequences
To Be Published pp. - 0

Experiment:

SOLUTION NMR

NDB ID:

6DXM

PDB ID:

6DXM 

Release:

2019-07-03

Title:

NMR structure for Sp1 transcription factor duplex 5'-d(TGGGCGGGG)

Classification:

DNA

Authors:

Davis, E.V., Hennig, M., Arya, D.P.

Citation:

An NMR Structure Determination and Analysis of Four Sp1 Consensus Sequences
To Be Published pp. - 0

Experiment:

SOLUTION NMR