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As of 22-Jun-2016 number of released structures: 8305
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Polymer Type: All + Protein Function: All + Structural Features: All + Experimental Method: All

Results: 5583  Download results as an excel file       Gallery view

NDB ID:

5B40

PDB ID:

5B40 

Release:

2016-06-22

Title:

The nucleosome structure containing H2B-K120 and H4-K31 monoubiquitinations

Classification:

STRUCTURAL PROTEIN/DNA

Authors:

Machida, S., Sekine, S., Nishiyama, Y., Horikoshi, N., Kurumizaka, H.

Citation:

Monoubiquitination of histones H2B and H4 changes the nucleosome stability without affecting the nucleosome structure
To Be Published pp. - 0

Experiment:

X-RAY DIFFRACTION Resolution:3.33Å R work:0.201R free:0.262

NDB ID:

5C5J

PDB ID:

5C5J 

Release:

2016-06-22

Title:

Poymerase Nucleotide complex

Classification:

Transferase/DNA

Authors:

Kottur, J., Nair, D.T.

Citation:

Reactive Oxygen Species Play an Important Role in the Bactericidal Activity of Quinolone Antibiotics
Angew.Chem.Int.Ed.Engl. 55 pp.2397 - 2400 2016

Experiment:

X-RAY DIFFRACTION Resolution:2.1Å R work:0.222R free:0.274

NDB ID:

5I2D

PDB ID:

5I2D 

Release:

2016-06-22

Title:

Crystal structure of T. thermophilus TTHB099 class II transcription activation complex: TAP-RPo

Classification:

TRANSCRIPTION/DNA/RNA

Authors:

Feng, Y., Zhang, Y., Ebright, R.H.

Citation:

Structural basis of transcription activation.
Science 352 pp.1330 - 1333 2016

Experiment:

X-RAY DIFFRACTION Resolution:4.405Å R work:0.241R free:0.284

NDB ID:

5J3G

PDB ID:

5J3G 

Release:

2016-06-22

Title:

Solution NMR structure of PT-free dsDNA from Streptomyces lividans

Classification:

DNA

Authors:

Lan, W., Hu, Z., Shen, J., Wang, C., Jiang, F., Liu, H., Long, D., Liu, M., Cao, C.

Citation:

Structural investigation into physiological DNA phosphorothioate modification
Sci Rep 6 pp.25737 - 25737 2016

Experiment:

SOLUTION NMR

NDB ID:

5JLW

PDB ID:

5JLW 

Release:

2016-06-22

Title:

AntpHD with 15bp DNA duplex R-monothiolated at Cytidine-8

Classification:

Transcription Regulator/DNA

Authors:

Nguyen, D., Zandarashvili, L., White, M.A., Iwahara, J.

Citation:

Stereospecific effects of oxygen-to-sulfur substitution in DNA phosphate on ion-pair dynamics and protein-DNA affinity.
Chembiochem pp. - 2016

Experiment:

X-RAY DIFFRACTION Resolution:2.088Å R work:0.218R free:0.242

NDB ID:

5JLX

PDB ID:

5JLX 

Release:

2016-06-22

Title:

AntpHD with 15bp DNA duplex S-monothiolated at Cytidine-8

Classification:

Transcription Regulator/DNA

Authors:

Nguyen, D., Zandarashvili, L., White, M.A., Iwahara, J.

Citation:

Stereospecific effects of oxygen-to-sulfur substitution in DNA phosphate on ion-pair dynamics and protein-DNA affinity.
Chembiochem pp. - 2016

Experiment:

X-RAY DIFFRACTION Resolution:2.748Å R work:0.192R free:0.246

NDB ID:

5K58

PDB ID:

5K58 

Release:

2016-06-22

Title:

Structure of the K. pneumonia SlmA-DNA complex bound to the C-terminal of the cell division protein FtsZ

Classification:

DNA BINDING PROTEIN/DNA

Authors:

Schumacher, M.A., Zeng, W.

Citation:

Structures of the nucleoid occlusion protein SlmA bound to DNA and the C-terminal domain of the cytoskeletal protein FtsZ.
Proc. Natl. Acad. Sci. U.S.A. 113 pp.4988 - 4993 2016

Experiment:

X-RAY DIFFRACTION Resolution:2.772Å R work:0.246R free:0.267

NDB ID:

5K98

PDB ID:

5K98 

Release:

2016-06-22

Title:

Structure of HipA-HipB-O2-O3 complex

Classification:

TRANSCRIPTION/DNA

Authors:

Schumacher, M.A., Balani, P., Min, J., Chinnam, N.B., Hansen, S., Vulic, M., Lewis, K., Brennan, R.G.

Citation:

HipBA-promoter structures reveal the basis of heritable multidrug tolerance.
Nature 524 pp.59 - 64 2015

Experiment:

X-RAY DIFFRACTION Resolution:3.99Å R work:0.349R free:0.375

NDB ID:

5KFA

PDB ID:

5KFA 

Release:

2016-06-22

Title:

Human DNA polymerase eta-DNA ternary complex: ground state at pH7.0 (K+ MES) with 1 Ca2+ ion

Classification:

REPLICATION, TRANSFERASE/DNA

Authors:

Gao, Y., Yang, W.

Citation:

Capture of a third Mg2+ is essential for catalyzing DNA synthesis.
Science 352 pp.1334 - 1337 2016

Experiment:

X-RAY DIFFRACTION Resolution:1.51Å R work:0.172R free:0.202

NDB ID:

5KFB

PDB ID:

5KFB 

Release:

2016-06-22

Title:

Human DNA polymerase eta-DNA ternary complex: reaction with 1 mM Mn2+ for 90s

Classification:

REPLICATION, TRANSFERASE/DNA

Authors:

Gao, Y., Yang, W.

Citation:

Capture of a third Mg2+ is essential for catalyzing DNA synthesis.
Science 352 pp.1334 - 1337 2016

Experiment:

X-RAY DIFFRACTION Resolution:1.55Å R work:0.174R free:0.205

NDB ID:

5KFC

PDB ID:

5KFC 

Release:

2016-06-22

Title:

Human DNA polymerase eta-DNA ternary complex: reaction with 1 mM Mn2+ for 180s

Classification:

REPLICATION, TRANSFERASE/DNA

Authors:

Gao, Y., Yang, W.

Citation:

Capture of a third Mg2+ is essential for catalyzing DNA synthesis.
Science 352 pp.1334 - 1337 2016

Experiment:

X-RAY DIFFRACTION Resolution:1.5Å R work:0.18R free:0.209

NDB ID:

5KFD

PDB ID:

5KFD 

Release:

2016-06-22

Title:

Human DNA polymerase eta-DNA ternary complex: reaction with 1 mM Mn2+ for 300s

Classification:

REPLICATION, TRANSFERASE/DNA

Authors:

Gao, Y., Yang, W.

Citation:

Capture of a third Mg2+ is essential for catalyzing DNA synthesis.
Science 352 pp.1334 - 1337 2016

Experiment:

X-RAY DIFFRACTION Resolution:1.65Å R work:0.182R free:0.219

NDB ID:

5KFE

PDB ID:

5KFE 

Release:

2016-06-22

Title:

Human DNA polymerase eta-DNA ternary complex: reaction with 1 mM Mn2+ for 600s

Classification:

REPLICATION, TRANSFERASE/DNA

Authors:

Gao, Y., Yang, W.

Citation:

Capture of a third Mg2+ is essential for catalyzing DNA synthesis.
Science 352 pp.1334 - 1337 2016

Experiment:

X-RAY DIFFRACTION Resolution:1.55Å R work:0.172R free:0.203

NDB ID:

5KFF

PDB ID:

5KFF 

Release:

2016-06-22

Title:

Human DNA polymerase eta-DNA ternary complex: reaction with 1 mM Mn2+ for 1800s

Classification:

REPLICATION, TRANSFERASE/DNA

Authors:

Gao, Y., Yang, W.

Citation:

Capture of a third Mg2+ is essential for catalyzing DNA synthesis.
Science 352 pp.1334 - 1337 2016

Experiment:

X-RAY DIFFRACTION Resolution:1.7Å R work:0.182R free:0.22

NDB ID:

5KFH

PDB ID:

5KFH 

Release:

2016-06-22

Title:

Human DNA polymerase eta-DNA ternary complex: reaction with 10 mM Mn2+ for 90s

Classification:

replication, transferase/DNA

Authors:

Gao, Y., Yang, W.

Citation:

Capture of a third Mg2+ is essential for catalyzing DNA synthesis.
Science 352 pp.1334 - 1337 2016

Experiment:

X-RAY DIFFRACTION Resolution:1.72Å R work:0.169R free:0.215

NDB ID:

5KFJ

PDB ID:

5KFJ 

Release:

2016-06-22

Title:

Human DNA polymerase eta-DNA ternary complex: reaction with 10 mM Mn2+ for 180s

Classification:

replication, transferase/dna

Authors:

Gao, Y., Yang, W.

Citation:

Capture of a third Mg2+ is essential for catalyzing DNA synthesis.
Science 352 pp.1334 - 1337 2016

Experiment:

X-RAY DIFFRACTION Resolution:1.7Å R work:0.167R free:0.209

NDB ID:

5KFK

PDB ID:

5KFK 

Release:

2016-06-22

Title:

Human DNA polymerase eta-DNA ternary complex: reaction with 10 mM Mn2+ for 300s

Classification:

REPLICATION, TRANSFERASE/DNA

Authors:

Gao, Y., Yang, W.

Citation:

Capture of a third Mg2+ is essential for catalyzing DNA synthesis.
Science 352 pp.1334 - 1337 2016

Experiment:

X-RAY DIFFRACTION Resolution:1.7Å R work:0.172R free:0.21

NDB ID:

5KFL

PDB ID:

5KFL 

Release:

2016-06-22

Title:

Human DNA polymerase eta-DNA ternary complex: reaction with 10 mM Mn2+ for 600s

Classification:

REPLICATION, TRANSFERASE/DNA

Authors:

Gao, Y., Yang, W.

Citation:

Capture of a third Mg2+ is essential for catalyzing DNA synthesis.
Science 352 pp.1334 - 1337 2016

Experiment:

X-RAY DIFFRACTION Resolution:1.65Å R work:0.171R free:0.208

NDB ID:

5KFM

PDB ID:

5KFM 

Release:

2016-06-22

Title:

Human DNA polymerase eta-DNA ternary complex with Sp-dATP-alpha-S: ground state at pH7.0 (K+ MES) with 1 Ca2+ ion

Classification:

replication, transferase/dna

Authors:

Gao, Y., Yang, W.

Citation:

Capture of a third Mg2+ is essential for catalyzing DNA synthesis.
Science 352 pp.1334 - 1337 2016

Experiment:

X-RAY DIFFRACTION Resolution:1.6Å R work:0.194R free:0.233

NDB ID:

5KFN

PDB ID:

5KFN 

Release:

2016-06-22

Title:

Human DNA polymerase eta-DNA ternary complex with Sp-dATP-alpha-S: reaction with 1 mM Mg2+ for 1800s

Classification:

replication, transferase/dna

Authors:

Gao, Y., Yang, W.

Citation:

Capture of a third Mg2+ is essential for catalyzing DNA synthesis.
Science 352 pp.1334 - 1337 2016

Experiment:

X-RAY DIFFRACTION Resolution:1.45Å R work:0.187R free:0.216

NDB ID:

5KFO

PDB ID:

5KFO 

Release:

2016-06-22

Title:

Human DNA polymerase eta-DNA ternary complex with Sp-dATP-alpha-S: reaction with 1 mM Mn2+ for 1800s

Classification:

replication, transferase/dna

Authors:

Gao, Y., Yang, W.

Citation:

Capture of a third Mg2+ is essential for catalyzing DNA synthesis.
Science 352 pp.1334 - 1337 2016

Experiment:

X-RAY DIFFRACTION Resolution:1.52Å R work:0.179R free:0.212

NDB ID:

5KFP

PDB ID:

5KFP 

Release:

2016-06-22

Title:

Human DNA polymerase eta-DNA ternary complex with Sp-dATP-alpha-S: reaction with 20 mM Mg2+ for 600s

Classification:

replication, transferase/dna

Authors:

Gao, Y., Yang, W.

Citation:

Capture of a third Mg2+ is essential for catalyzing DNA synthesis.
Science 352 pp.1334 - 1337 2016

Experiment:

X-RAY DIFFRACTION Resolution:1.7Å R work:0.176R free:0.22

NDB ID:

5KFR

PDB ID:

5KFR 

Release:

2016-06-22

Title:

Human DNA polymerase eta-DNA ternary complex with Sp-dATP-alpha-S: reaction with 20 mM Mn2+ for 600s

Classification:

replication, transferase/dna

Authors:

Gao, Y., Yang, W.

Citation:

Capture of a third Mg2+ is essential for catalyzing DNA synthesis.
Science 352 pp.1334 - 1337 2016

Experiment:

X-RAY DIFFRACTION Resolution:1.75Å R work:0.175R free:0.222

NDB ID:

5KFT

PDB ID:

5KFT 

Release:

2016-06-22

Title:

Human DNA polymerase eta R61A-DNA ternary complex: reaction with 1 mM Mg2+ for 40s

Classification:

REPLICATION, TRANSFERASE/DNA

Authors:

Gao, Y., Yang, W.

Citation:

Capture of a third Mg2+ is essential for catalyzing DNA synthesis.
Science 352 pp.1334 - 1337 2016

Experiment:

X-RAY DIFFRACTION Resolution:1.52Å R work:0.181R free:0.21

NDB ID:

5KFU

PDB ID:

5KFU 

Release:

2016-06-22

Title:

Human DNA polymerase eta R61A-DNA ternary complex: reaction with 1 mM Mg2+ for 80s

Classification:

REPLICATION, TRANSFERASE/DNA

Authors:

Gao, Y., Yang, W.

Citation:

Capture of a third Mg2+ is essential for catalyzing DNA synthesis.
Science 352 pp.1334 - 1337 2016

Experiment:

X-RAY DIFFRACTION Resolution:1.55Å R work:0.181R free:0.21

NDB ID:

5KFV

PDB ID:

5KFV 

Release:

2016-06-22

Title:

Human DNA polymerase eta R61A-DNA ternary complex: reaction with 1 mM Mg2+ for 140s

Classification:

replication, transferase/dna

Authors:

Gao, Y., Yang, W.

Citation:

Capture of a third Mg2+ is essential for catalyzing DNA synthesis.
Science 352 pp.1334 - 1337 2016

Experiment:

X-RAY DIFFRACTION Resolution:1.6Å R work:0.195R free:0.229

NDB ID:

5KFW

PDB ID:

5KFW 

Release:

2016-06-22

Title:

Human DNA polymerase eta R61A-DNA ternary complex: reaction with 1 mM Mg2+ for 200s

Classification:

replication, transferase/dna

Authors:

Gao, Y., Yang, W.

Citation:

Capture of a third Mg2+ is essential for catalyzing DNA synthesis.
Science 352 pp.1334 - 1337 2016

Experiment:

X-RAY DIFFRACTION Resolution:1.62Å R work:0.179R free:0.21

NDB ID:

5KFX

PDB ID:

5KFX 

Release:

2016-06-22

Title:

Human DNA polymerase eta R61A-DNA ternary complex: reaction with 1 mM Mg2+ for 300s

Classification:

replication, transferase/dna

Authors:

Gao, Y., Yang, W.

Citation:

Capture of a third Mg2+ is essential for catalyzing DNA synthesis.
Science 352 pp.1334 - 1337 2016

Experiment:

X-RAY DIFFRACTION Resolution:1.52Å R work:0.18R free:0.212

NDB ID:

5KFY

PDB ID:

5KFY 

Release:

2016-06-22

Title:

Human DNA polymerase eta-DNA ternary complex: reaction first with 1 mM Mn2+ for 1800s then with 5 mM Mn2+ for 60s at 4 degree

Classification:

replication, transferase/dna

Authors:

Gao, Y., Yang, W.

Citation:

Capture of a third Mg2+ is essential for catalyzing DNA synthesis.
Science 352 pp.1334 - 1337 2016

Experiment:

X-RAY DIFFRACTION Resolution:1.7Å R work:0.201R free:0.228

NDB ID:

5KFZ

PDB ID:

5KFZ 

Release:

2016-06-22

Title:

Human DNA polymerase eta-DNA ternary complex: reaction first with 1 mM Mn2+ for 1800s then with 5 mM Mn2+ for 60s at 14 degree

Classification:

replication, transferase/dna

Authors:

Gao, Y., Yang, W.

Citation:

Capture of a third Mg2+ is essential for catalyzing DNA synthesis.
Science 352 pp.1334 - 1337 2016

Experiment:

X-RAY DIFFRACTION Resolution:1.44Å R work:0.184R free:0.215

NDB ID:

5KG1

PDB ID:

5KG1 

Release:

2016-06-22

Title:

Human DNA polymerase eta-DNA ternary complex: reaction first with 1 mM Mn2+ for 1800s then with 5 mM Mn2+ for 60s at 30 degree

Classification:

replication, transferase/dna

Authors:

Gao, Y., Yang, W.

Citation:

Capture of a third Mg2+ is essential for catalyzing DNA synthesis.
Science 352 pp.1334 - 1337 2016

Experiment:

X-RAY DIFFRACTION Resolution:1.62Å R work:0.181R free:0.221

NDB ID:

5KG2

PDB ID:

5KG2 

Release:

2016-06-22

Title:

Human DNA polymerase eta-DNA ternary complex: reaction first with 1 mM Mn2+ for 1800s then with 5 mM Mn2+ for 60s at 37 degree

Classification:

replication, transferase/dna

Authors:

Gao, Y., Yang, W.

Citation:

Capture of a third Mg2+ is essential for catalyzing DNA synthesis.
Science 352 pp.1334 - 1337 2016

Experiment:

X-RAY DIFFRACTION Resolution:1.6Å R work:0.183R free:0.203

NDB ID:

5KG3

PDB ID:

5KG3 

Release:

2016-06-22

Title:

Human DNA polymerase eta-DNA ternary complex: reaction first with 1 mM Mn2+ for 1800s then with 10 mM Mn2+ for 60s

Classification:

replication, transferase/dna

Authors:

Gao, Y., Yang, W.

Citation:

Capture of a third Mg2+ is essential for catalyzing DNA synthesis.
Science 352 pp.1334 - 1337 2016

Experiment:

X-RAY DIFFRACTION Resolution:1.7Å R work:0.197R free:0.236

NDB ID:

5KG4

PDB ID:

5KG4 

Release:

2016-06-22

Title:

Human DNA polymerase eta-DNA ternary complex: reaction first with 1 mM Mn2+ for 1800s then with 10 mM Mg2+ for 60s

Classification:

replication, transferase/dna

Authors:

Gao, Y., Yang, W.

Citation:

Capture of a third Mg2+ is essential for catalyzing DNA synthesis.
Science 352 pp.1334 - 1337 2016

Experiment:

X-RAY DIFFRACTION Resolution:1.6Å R work:0.187R free:0.223

NDB ID:

5KG5

PDB ID:

5KG5 

Release:

2016-06-22

Title:

Human DNA polymerase eta-DNA ternary complex: reaction first with 1 mM Mn2+ for 1800s then with 10 mM Cd2+ for 60s

Classification:

replication, transferase/dna

Authors:

Gao, Y., Yang, W.

Citation:

Capture of a third Mg2+ is essential for catalyzing DNA synthesis.
Science 352 pp.1334 - 1337 2016

Experiment:

X-RAY DIFFRACTION Resolution:1.6Å R work:0.184R free:0.218

NDB ID:

5KG7

PDB ID:

5KG7 

Release:

2016-06-22

Title:

Human DNA polymerase eta-DNA ternary complex: reaction first with 1 mM Mn2+ for 1800s then with 10 mM Zn2+ for 60s

Classification:

replication, transferase/dna

Authors:

Gao, Y., Yang, W.

Citation:

Capture of a third Mg2+ is essential for catalyzing DNA synthesis.
Science 352 pp.1334 - 1337 2016

Experiment:

X-RAY DIFFRACTION Resolution:1.75Å R work:0.186R free:0.227

NDB ID:

5L9X

PDB ID:

5L9X 

Release:

2016-06-22

Title:

Human DNA polymerase eta-DNA ternary complex: reaction with 10 mM Mn2+ for 60s

Classification:

TRANSFERASE

Authors:

Gao, Y., Yang, W.

Citation:

Capture of a third Mg2+ is essential for catalyzing DNA synthesis.
Science 352 pp.1334 - 1337 2016

Experiment:

X-RAY DIFFRACTION Resolution:1.9Å R work:0.164R free:0.214

NDB ID:

5B2I

PDB ID:

5B2I 

Release:

2016-06-15

Title:

Human nucleosome containing CpG unmethylated DNA

Classification:

TRANSCRIPTION/DNA

Authors:

Fujii, Y., Wakamori, M., Umehara, T., Yokoyama, S.

Citation:

Crystal structure of human nucleosome core particle containing enzymatically introduced CpG methylation
Febs Open Bio 6 pp.498 - 514 2016

Experiment:

X-RAY DIFFRACTION Resolution:3.0Å R work:0.2R free:0.256

NDB ID:

5B2J

PDB ID:

5B2J 

Release:

2016-06-15

Title:

Human nucleosome containing CpG methylated DNA

Classification:

TRANSCRIPTION/DNA

Authors:

Fujii, Y., Wakamori, M., Umehara, T., Yokoyama, S.

Citation:

Crystal structure of human nucleosome core particle containing enzymatically introduced CpG methylation
Febs Open Bio 6 pp.498 - 514 2016

Experiment:

X-RAY DIFFRACTION Resolution:2.6Å R work:0.197R free:0.252

NDB ID:

5E24

PDB ID:

5E24 

Release:

2016-06-15

Title:

Structure of the Su(H)-Hairless-DNA Repressor Complex

Classification:

TRANSPORT/DNA Binding/DNA

Authors:

Kovall, R.A., Yuan, Z.

Citation:

Structure and Function of the Su(H)-Hairless Repressor Complex: the Major Antagonist of Notch Signaling in Drosophila melanogaster
to be published pp. - 0

Experiment:

X-RAY DIFFRACTION Resolution:2.14Å R work:0.172R free:0.192

NDB ID:

5F55

PDB ID:

5F55 

Release:

2016-06-15

Title:

Structure of RecJ complexed with DNA

Classification:

DNA BINDING PROTEIN/DNA

Authors:

Cheng, K., Xu, H., Chen, X., Wang, L., Tian, B., Zhao, Y., Hua, Y.

Citation:

Structural basis for DNA 5 -end resection by RecJ
Elife 5 pp. - 2016

Experiment:

X-RAY DIFFRACTION Resolution:2.6Å R work:0.184R free:0.228

NDB ID:

5F56

PDB ID:

5F56 

Release:

2016-06-15

Title:

Structure of RecJ complexed with DNA and SSB-ct

Classification:

DNA BINDING PROTEIN/DNA

Authors:

Cheng, K., Xu, H., Chen, X., Wang, L., Tian, B., Zhao, Y., Hua, Y.

Citation:

Structural basis for DNA 5 -end resection by RecJ
Elife 5 pp. - 2016

Experiment:

X-RAY DIFFRACTION Resolution:2.3Å R work:0.225R free:0.238

NDB ID:

5FW2

PDB ID:

5FW2 

Release:

2016-06-15

Title:

Crystal structure of SpCas9 variant EQR bound to sgRNA and TGAG PAM target DNA

Classification:

HYDROLASE/DNA/RNA

Authors:

Anders, C., Bargsten, K., Jinek, M.

Citation:

Structural Plasticity of Pam Recognition by Engineered Variants of the RNA-Guided Endonuclease Cas9.
Mol.Cell 61 pp.895 - 2016

Experiment:

X-RAY DIFFRACTION Resolution:2.676Å R work:0.204R free:0.231

NDB ID:

5FW3

PDB ID:

5FW3 

Release:

2016-06-15

Title:

Crystal structure of SpCas9 variant VRER bound to sgRNA and TGCG PAM target DNA

Classification:

HYDROLASE/DNA/RNA

Authors:

Anders, C., Bargsten, K., Jinek, M.

Citation:

Structural Plasticity of Pam Recognition by Engineered Variants of the RNA-Guided Endonuclease Cas9.
Mol.Cell 61 pp.895 - 2016

Experiment:

X-RAY DIFFRACTION Resolution:2.7Å R work:0.214R free:0.241

NDB ID:

5K1Y

PDB ID:

5K1Y 

Release:

2016-06-15

Title:

P2(1) Structure of pNOB8 AspA-DNA complex

Classification:

TRANSCRIPTION/DNA

Authors:

Schumacher, M.

Citation:

Detailed structural analysis of AspA-DNA contacts
To Be Published pp. - 0

Experiment:

X-RAY DIFFRACTION Resolution:2.97Å R work:0.209R free:0.279

NDB ID:

5K5O

PDB ID:

5K5O 

Release:

2016-06-15

Title:

Structure of AspA-26mer DNA complex

Classification:

TRANSCRIPTION/DNA

Authors:

Schumacher, M.A., Tonthat, N.K., Lee, J., Rodriguez-Castaneda, F.A., Chinnam, N.B., Kalliomaa-Sanford, A.K., Ng, I.W., Barge, M.T., Shaw, P.L., Barilla, D.

Citation:

Structures of archaeal DNA segregation machinery reveal bacterial and eukaryotic linkages.
Science 349 pp.1120 - 1124 2015

Experiment:

X-RAY DIFFRACTION Resolution:3.2Å R work:0.256R free:0.289

NDB ID:

5K5R

PDB ID:

5K5R 

Release:

2016-06-15

Title:

AspA-32mer DNA,crystal form 2

Classification:

TRANSCRIPTION/DNA

Authors:

Schumacher, M.A., Tonthat, N.K., Lee, J., Rodriguez-Castaneda, F.A., Chinnam, N.B., Kalliomaa-Sanford, A.K., Ng, I.W., Barge, M.T., Shaw, P.L., Barilla, D.

Citation:

Structures of archaeal DNA segregation machinery reveal bacterial and eukaryotic linkages.
Science 349 pp.1120 - 1124 2015

Experiment:

X-RAY DIFFRACTION Resolution:3.09Å R work:0.201R free:0.274

NDB ID:

5DG7

PDB ID:

5DG7 

Release:

2016-06-08

Title:

CRYSTAL STRUCTURE OF HUMAN DNA POLYMERASE ETA INSERTING dTTP ACROSS A DNA TEMPLATE CONTAINING 1,N6-ETHENODEOXYADENOSINE LESION

Classification:

Transferase/DNA

Authors:

Patra, A., Su, Y., Zhang, Q., Johnson, K.M., Guengerich, F.P., Egli, M.

Citation:

Structural and Kinetic Analysis of Miscoding Opposite the DNA Adduct 1,N6-Ethenodeoxyadenosine by Human Translesion DNA Polymerase eta.
J.Biol.Chem. pp. - 2016

Experiment:

X-RAY DIFFRACTION Resolution:2.26Å R work:0.155R free:0.212

NDB ID:

5DG8

PDB ID:

5DG8 

Release:

2016-06-08

Title:

CRYSTAL STRUCTURE OF HUMAN DNA POLYMERASE ETA INSERTING dAMPNPP ACROSS A DNA TEMPLATE CONTAINING 1,N6-ETHENODEOXYADENOSINE LESION

Classification:

Transferase/DNA

Authors:

Patra, A., Su, Y., Zhang, Q., Johnson, K.M., Guengerich, F.P., Egli, M.

Citation:

Structural and Kinetic Analysis of Miscoding Opposite the DNA Adduct 1,N6-Ethenodeoxyadenosine by Human Translesion DNA Polymerase eta.
J.Biol.Chem. pp. - 2016

Experiment:

X-RAY DIFFRACTION Resolution:2.12Å R work:0.173R free:0.239

NDB ID:

5DG9

PDB ID:

5DG9 

Release:

2016-06-08

Title:

CRYSTAL STRUCTURE OF HUMAN DNA POLYMERASE ETA INSERTING dGMPNPP ACROSS A DNA TEMPLATE CONTAINING 1,N6-ETHENODEOXYADENOSINE LESION

Classification:

Transferase/DNA

Authors:

Patra, A., Su, Y., Zhang, Q., Johnson, K.M., Guengerich, F.P., Egli, M.

Citation:

Structural and Kinetic Analysis of Miscoding Opposite the DNA Adduct 1,N6-Ethenodeoxyadenosine by Human Translesion DNA Polymerase eta.
J.Biol.Chem. pp. - 2016

Experiment:

X-RAY DIFFRACTION Resolution:2.15Å R work:0.17R free:0.222