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As of 27-Aug-2014 number of released structures: 7378
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Polymer Type: All + RNA Type: All + Protein Function: All + Experimental Method: All + RNA Sequence Type: All RNA Sequence

Results: 2873   (Gallery view)

NDB ID:

NA2995

PDB ID:

4QCN 

Release:

2014-08-20

Title:

Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing acylated tRNA- substrates in the A and P sites. This entry contains the 50S subunit of the first 70S ribosome in the ASU.

Classification:

RIBOSOME

Authors:

Polikanov, Y.S., Steitz, T.A., Innis, C.A.

Citation:

A proton wire to couple aminoacyl-tRNA accommodation and peptide bond formation on the ribosome
Nat.Struct.Mol.Biol. pp. - 2014

Experiment:

X-RAY DIFFRACTION Resolution:2.6Å R work:0.222R free:0.263

Equivalence Class: 

NR_all_86444.20 

Eq. Class Rep:

4QCN

NDB ID:

NA2996

PDB ID:

4QCM 

Release:

2014-08-20

Title:

Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing acylated tRNA-substrates in the A and P sites. This entry contains the 30S subunit of the first 70S ribosome in the ASU.

Classification:

RIBOSOME

Authors:

Polikanov, Y.S., Steitz, T.A., Innis, C.A.

Citation:

A proton wire to couple aminoacyl-tRNA accommodation and peptide bond formation on the ribosome
Nat.Struct.Mol.Biol. pp. - 2014

Experiment:

X-RAY DIFFRACTION Resolution:2.6Å R work:0.222R free:0.263

Equivalence Class: 

NR_all_42982.31 

Eq. Class Rep:

1FJG

NDB ID:

NA2997

PDB ID:

4QCO 

Release:

2014-08-20

Title:

Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing acylated tRNA-substrates in the A and P sites. This entry contains the 30S subunit of the second 70S ribosome in the ASU.

Classification:

RIBOSOME

Authors:

Polikanov, Y.S., Steitz, T.A., Innis, C.A.

Citation:

A proton wire to couple aminoacyl-tRNA accommodation and peptide bond formation on the ribosome
Nat.Struct.Mol.Biol. pp. - 2014

Experiment:

X-RAY DIFFRACTION Resolution:2.6Å R work:0.222R free:0.263

Equivalence Class: 

NR_all_42982.31 

Eq. Class Rep:

1FJG

NDB ID:

NA3006

PDB ID:

4QCP 

Release:

2014-08-20

Title:

Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing acylated tRNA-substrates in the A and P sites. This entry contains the 50S subunit of the second 70S ribosome in the ASU.

Classification:

RIBOSOME

Authors:

Polikanov, Y.S., Steitz, T.A., Innis, C.A.

Citation:

A proton wire to couple aminoacyl-tRNA accommodation and peptide bond formation on the ribosome
Nat.Struct.Mol.Biol. pp. - 2014

Experiment:

X-RAY DIFFRACTION Resolution:2.6Å R work:0.222R free:0.263

Equivalence Class: 

NR_all_86444.20 

Eq. Class Rep:

4QCN

NDB ID:

NA3007

PDB ID:

4QCQ 

Release:

2014-08-20

Title:

Crystal structure of the Thermus thermophilus 70S ribosome in the post-catalysis state of peptide bond formation containing dipeptydil-tRNA in the A site and deacylated tRNA in the P site. This entry contains the 50S subunit of the first 70S ribosome in the ASU.

Classification:

RIBOSOME

Authors:

Polikanov, Y.S., Steitz, T.A., Innis, C.A.

Citation:

A proton wire to couple aminoacyl-tRNA accommodation and peptide bond formation on the ribosome
Nat.Struct.Mol.Biol. pp. - 2014

Experiment:

X-RAY DIFFRACTION Resolution:2.55Å R work:0.232R free:0.279

Equivalence Class: 

NR_all_42982.31 

Eq. Class Rep:

1FJG

NDB ID:

NA3008

PDB ID:

4QCS 

Release:

2014-08-20

Title:

Crystal structure of the Thermus thermophilus 70S ribosome in the post-catalysis state of peptide bond formation containing dipeptydil-tRNA in the A site and deacylated tRNA in the P site. This entry contains the 30S subunit of the second 70S ribosome in the ASU.

Classification:

RIBOSOME

Authors:

Polikanov, Y.S., Steitz, T.A., Innis, C.A.

Citation:

A proton wire to couple aminoacyl-tRNA accommodation and peptide bond formation on the ribosome
Nat.Struct.Mol.Biol. pp. - 2014

Experiment:

X-RAY DIFFRACTION Resolution:2.55Å R work:0.232R free:0.279

Equivalence Class: 

NR_all_42982.31 

Eq. Class Rep:

1FJG

NDB ID:

NA3009

PDB ID:

4QCT 

Release:

2014-08-20

Title:

Crystal structure of the Thermus thermophilus 70S ribosome in the post-catalysis state of peptide bond formation containing dipeptydil-tRNA in the A site and deacylated tRNA in the P site. This entry contains the 50S subunit of the second 70S ribosome in the ASU.

Classification:

RIBOSOME

Authors:

Polikanov, Y.S., Steitz, T.A., Innis, C.A.

Citation:

A proton wire to couple aminoacyl-tRNA accommodation and peptide bond formation on the ribosome
Nat.Struct.Mol.Biol. pp. - 2014

Experiment:

X-RAY DIFFRACTION Resolution:2.55Å R work:0.232R free:0.279

Equivalence Class: 

NR_all_86444.20 

Eq. Class Rep:

4QCN

NDB ID:

NA3010

PDB ID:

4QCR 

Release:

2014-08-20

Title:

Crystal structure of the Thermus thermophilus 70S ribosome in the post-catalysis state of peptide bond formation containing dipeptydil-tRNA in the A site and deacylated tRNA in the P site. This entry contains the 50S subunit of the first 70S ribosome in the ASU.

Classification:

RIBOSOME

Authors:

Polikanov, Y.S., Steitz, T.A., Innis, C.A.

Citation:

A proton wire to couple aminoacyl-tRNA accommodation and peptide bond formation on the ribosome
Nat.Struct.Mol.Biol. pp. - 2014

Experiment:

X-RAY DIFFRACTION Resolution:2.55Å R work:0.232R free:0.279

Equivalence Class: 

NR_all_86444.20 

Eq. Class Rep:

4QCN

NDB ID:

NA3011

PDB ID:

4QCU 

Release:

2014-08-20

Title:

Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Puromycin in the A site and acylated tRNA in the P site. This entry contains the 30S subunit of the first 70S ribosome in the ASU.

Classification:

RIBOSOME

Authors:

Polikanov, Y.S., Steitz, T.A., Innis, C.A.

Citation:

A proton wire to couple aminoacyl-tRNA accommodation and peptide bond formation on the ribosome
Nat.Struct.Mol.Biol. pp. - 2014

Experiment:

X-RAY DIFFRACTION Resolution:2.9Å R work:0.23R free:0.286

Equivalence Class: 

NR_all_42982.31 

Eq. Class Rep:

1FJG

NDB ID:

NA3012

PDB ID:

4QCW 

Release:

2014-08-20

Title:

Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Puromycin in the A site and acylated tRNA in the P site. This entry contains the 30S subunit of the second 70S ribosome in the ASU.

Classification:

RIBOSOME

Authors:

Polikanov, Y.S., Steitz, T.A., Innis, C.A.

Citation:

A proton wire to couple aminoacyl-tRNA accommodation and peptide bond formation on the ribosome
Nat.Struct.Mol.Biol. pp. - 2014

Experiment:

X-RAY DIFFRACTION Resolution:2.9Å R work:0.23R free:0.286

Equivalence Class: 

NR_all_42982.31 

Eq. Class Rep:

1FJG

NDB ID:

NA3013

PDB ID:

4QCV 

Release:

2014-08-20

Title:

Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Puromycin in the A site and acylated tRNA in the P site. This entry contains the 50S subunit of the first 70S ribosome in the ASU.

Classification:

RIBOSOME

Authors:

Polikanov, Y.S., Steitz, T.A., Innis, C.A.

Citation:

A proton wire to couple aminoacyl-tRNA accommodation and peptide bond formation on the ribosome
Nat.Struct.Mol.Biol. pp. - 2014

Experiment:

X-RAY DIFFRACTION Resolution:2.9Å R work:0.23R free:0.286

Equivalence Class: 

NR_all_86444.20 

Eq. Class Rep:

4QCN

NDB ID:

NA3014

PDB ID:

4QCX 

Release:

2014-08-20

Title:

Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Puromycin in the A site and acylated tRNA in the P site. This entry contains the 50S subunit of the second 70S ribosome in the ASU.

Classification:

RIBOSOME

Authors:

Polikanov, Y.S., Steitz, T.A., Innis, C.A.

Citation:

A proton wire to couple aminoacyl-tRNA accommodation and peptide bond formation on the ribosome
Nat.Struct.Mol.Biol. pp. - 2014

Experiment:

X-RAY DIFFRACTION Resolution:2.9Å R work:0.23R free:0.286

Equivalence Class: 

NR_all_86444.20 

Eq. Class Rep:

4QCN

NDB ID:

NA3015

PDB ID:

4QCY 

Release:

2014-08-20

Title:

Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Cytidine-Puromycin in the A site and acylated tRNA in the P site. This entry contains the 30S subunit of the first 70S ribosome in the ASU.

Classification:

RIBOSOME

Authors:

Polikanov, Y.S., Steitz, T.A., Innis, C.A.

Citation:

A proton wire to couple aminoacyl-tRNA accommodation and peptide bond formation on the ribosome
Nat.Struct.Mol.Biol. pp. - 2014

Experiment:

X-RAY DIFFRACTION Resolution:2.8Å R work:0.233R free:0.28

Equivalence Class: 

NR_all_42982.31 

Eq. Class Rep:

1FJG

NDB ID:

NA3016

PDB ID:

4QD0 

Release:

2014-08-20

Title:

Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Cytidine-Puromycin in the A site and acylated tRNA in the P site. This entry contains the 30S subunit of the second 70S ribosome in the ASU.

Classification:

RIBOSOME

Authors:

Polikanov, Y.S., Steitz, T.A., Innis, C.A.

Citation:

A proton wire to couple aminoacyl-tRNA accommodation and peptide bond formation on the ribosome
Nat.Struct.Mol.Biol. pp. - 2014

Experiment:

X-RAY DIFFRACTION Resolution:2.8Å R work:0.233R free:0.28

Equivalence Class: 

NR_all_42982.31 

Eq. Class Rep:

1FJG

NDB ID:

NA3019

PDB ID:

4QCZ 

Release:

2014-08-20

Title:

Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Cytidine-Puromycin in the A site and acylated tRNA in the P site. This entry contains the 50S subunit of the first 70S ribosome in the ASU.

Classification:

RIBOSOME

Authors:

Polikanov, Y.S., Steitz, T.A., Innis, C.A.

Citation:

A proton wire to couple aminoacyl-tRNA accommodation and peptide bond formation on the ribosome
Nat.Struct.Mol.Biol. pp. - 2014

Experiment:

X-RAY DIFFRACTION Resolution:2.8Å R work:0.233R free:0.28

Equivalence Class: 

NR_all_86444.20 

Eq. Class Rep:

4QCN

NDB ID:

NA3020

PDB ID:

4QD1 

Release:

2014-08-20

Title:

Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Cytidine-Puromycin in the A site and acylated tRNA in the P site. This entry contains the 50S subunit of the second 70S ribosome in the ASU.

Classification:

RIBOSOME

Authors:

Polikanov, Y.S., Steitz, T.A., Innis, C.A.

Citation:

A proton wire to couple aminoacyl-tRNA accommodation and peptide bond formation on the ribosome
Nat.Struct.Mol.Biol. pp. - 2014

Experiment:

X-RAY DIFFRACTION Resolution:2.8Å R work:0.233R free:0.28

Equivalence Class: 

NR_all_86444.20 

Eq. Class Rep:

4QCN

NDB ID:

NA3124

PDB ID:

1VY8 

Release:

2014-08-20

Title:

Crystal structure of the E. coli CRISPR RNA-guided surveillance complex, Cascade

Classification:

Hydrolase/RNA

Authors:

Jackson, R.N., Golden, S.M., van Erp, P.B., Carter, J., Westra, E.R., Brouns, S.J., van der Oost, J., Terwilliger, T.C., Read, R.J., Wiedenheft, B.

Citation:

Crystal structure of the CRISPR RNA-guided surveillance complex from Escherichia coli.
Science pp. - 2014

Experiment:

X-RAY DIFFRACTION Resolution:3.24Å R work:0.233R free:0.267

Equivalence Class: 

NR_all_67832.1 

Eq. Class Rep:

1VY8

NDB ID:

NA3125

PDB ID:

1VY9 

Release:

2014-08-20

Title:

Crystal structure of the E. coli CRISPR RNA-guided surveillance complex, Cascade

Classification:

Hydrolase/RNA

Authors:

Jackson, R.N., Golden, S.M., van Erp, P.B., Carter, J., Westra, E.R., Brouns, S.J., van der Oost, J., Terwilliger, T.C., Read, R.J., Wiedenheft, B.

Citation:

Crystal structure of the CRISPR RNA-guided surveillance complex from Escherichia coli.
Science pp. - 2014

Experiment:

X-RAY DIFFRACTION Resolution:3.24Å R work:0.233R free:0.267

Equivalence Class: 

NR_all_56468.1 

Eq. Class Rep:

1VY9

NDB ID:

2MGZ

PDB ID:

2MGZ 

Release:

2014-08-13

Title:

Solution structure of RBFOX family ASD-1 RRM and SUP-12 RRM in ternary complex with RNA

Classification:

RNA BINDING PROTEIN/RNA

Authors:

Kuwasako, K., Takahashi, M., Unzai, S., Tsuda, K., Yoshikawa, S., He, F., Kobayashi, N., Guntert, P., Shirouzu, M., Ito, T., Tanaka, A., Yokoyama, S., Hagiwara, M., Kuroyanagi, H., Muto, Y.

Citation:

N/a
To be Published pp. - 0

Experiment:

SOLUTION NMR

Equivalence Class: 

NR_all_74365.1 

Eq. Class Rep:

2MGZ

NDB ID:

2RU3

PDB ID:

2RU3 

Release:

2014-08-13

Title:

Solution structure of c.elegans SUP-12 RRM in complex with RNA

Classification:

RNA BINDING PROTEIN/RNA

Authors:

Kuwasako, K., Takahashi, M., Unzai, S., Tsuda, K., Yoshikawa, S., He, F., Kobayashi, N., Guntert, P., Shirouzu, M., Ito, T., Tanaka, A., Yokoyama, S., Hagiwara, M., Kuroyanagi, H., Muto, Y.

Citation:

N/a
To be Published pp. - 0

Experiment:

SOLUTION NMR

Equivalence Class: 

NR_all_71732.1 

Eq. Class Rep:

2RU3

NDB ID:

NA3036

PDB ID:

4QLN 

Release:

2014-08-13

Title:

structure of ydao riboswitch binding with c-di-dAMP

Classification:

rna

Authors:

Ren, A., Patel, D.J.

Citation:

c-di-AMP binds the ydaO riboswitch in two pseudo-symmetry-related pockets.
Nat.Chem.Biol. pp. - 2014

Experiment:

X-RAY DIFFRACTION Resolution:2.65Å R work:0.216R free:0.289

Equivalence Class: 

NR_all_48881.1 

Eq. Class Rep:

4QLM

NDB ID:

NA3037

PDB ID:

4QLM 

Release:

2014-08-13

Title:

ydao riboswitch binding to c-di-AMP

Classification:

RNA

Authors:

Ren, A., Patel, D.J.

Citation:

c-di-AMP binds the ydaO riboswitch in two pseudo-symmetry-related pockets.
Nat.Chem.Biol. pp. - 2014

Experiment:

X-RAY DIFFRACTION Resolution:2.721Å R work:0.212R free:0.244

Equivalence Class: 

NR_all_48881.1 

Eq. Class Rep:

4QLM

NDB ID:

NA3066

PDB ID:

4QU6 

Release:

2014-08-13

Title:

Crystal structure of a G-rich RNA sequence binding factor 1 (GRSF1) from Homo sapiens at 1.75 A resolution

Classification:

RNA Binding Protein/RNA

Authors:

Joint Center for Structural Genomics (JCSG), Partnership for T-Cell Biology (TCELL)

Citation:

Crystal structure of a G-rich RNA sequence binding factor 1 (GRSF1) from Homo sapiens at 1.75 A resolution
To be published pp. - 0

Experiment:

X-RAY DIFFRACTION Resolution:1.75Å R work:0.182R free:0.246

Equivalence Class: 

NR_all_62587.1 

Eq. Class Rep:

4QU6

NDB ID:

NA3067

PDB ID:

4QU7 

Release:

2014-08-13

Title:

Crystal structure of a G-rich RNA sequence binding factor 1 (GRSF1) from Homo sapiens at 2.50 A resolution

Classification:

RNA Binding Protein/RNA

Authors:

Joint Center for Structural Genomics (JCSG), Partnership for T-Cell Biology (TCELL)

Citation:

Crystal structure of a G-rich RNA sequence binding factor 1 (GRSF1) from Homo sapiens at 2.50 A resolution
To be published pp. - 0

Experiment:

X-RAY DIFFRACTION Resolution:2.5Å R work:0.191R free:0.253

Equivalence Class: 

NR_all_25546.1 

Eq. Class Rep:

4QU7

NDB ID:

NA3103

PDB ID:

1VY0 

Release:

2014-08-13

Title:

Crystal Structure of Unmodified tRNA Proline (CGG) Bound to Codon CCG on the Ribosome

Classification:

RIBOSOME

Authors:

Maehigashi, T., Dunkle, J.A., Miles, S.J., Dunham, C.M.

Citation:

Structural insights into +1 frameshifting promoted by expanded or modification-deficient anticodon stem-loops
to be published pp. - 0

Experiment:

X-RAY DIFFRACTION Resolution:3.68Å R work:0.212R free:0.271

Equivalence Class: 

NR_all_42982.31 

Eq. Class Rep:

1FJG

NDB ID:

NA3104

PDB ID:

1VY1 

Release:

2014-08-13

Title:

Crystal Structure of Unmodified tRNA Proline (CGG) Bound to Codon CCG on the Ribosome

Classification:

RIBOSOME

Authors:

Maehigashi, T., Dunkle, J.A., Miles, S.J., Dunham, C.M.

Citation:

Structural insights into +1 frameshifting promoted by expanded or modification-deficient anticodon stem-loops
to be published pp. - 0

Experiment:

X-RAY DIFFRACTION Resolution:3.68Å R work:0.212R free:0.271

Equivalence Class: 

NR_all_86444.20 

Eq. Class Rep:

4QCN

NDB ID:

NA3105

PDB ID:

1VY2 

Release:

2014-08-13

Title:

Crystal Structure of Unmodified tRNA Proline (CGG) Bound to Codon CCG on the Ribosome

Classification:

RIBOSOME

Authors:

Maehigashi, T., Dunkle, J.A., Miles, S.J., Dunham, C.M.

Citation:

Structural insights into +1 frameshifting promoted by expanded or modification-deficient anticodon stem-loops
to be published pp. - 0

Experiment:

X-RAY DIFFRACTION Resolution:3.68Å R work:0.212R free:0.271

Equivalence Class: 

NR_all_42982.31 

Eq. Class Rep:

1FJG

NDB ID:

NA3106

PDB ID:

1VY3 

Release:

2014-08-13

Title:

Crystal Structure of Unmodified tRNA Proline (CGG) Bound to Codon CCG on the Ribosome

Classification:

RIBOSOME

Authors:

Maehigashi, T., Dunkle, J.A., Miles, S.J., Dunham, C.M.

Citation:

Structural insights into +1 frameshifting promoted by expanded or modification-deficient anticodon stem-loops
to be published pp. - 0

Experiment:

X-RAY DIFFRACTION Resolution:3.68Å R work:0.212R free:0.271

Equivalence Class: 

NR_all_86444.20 

Eq. Class Rep:

4QCN

NDB ID:

NA2560

PDB ID:

4KWZ 

Release:

2014-08-06

Title:

Crystal Structure of Frameshift Suppressor tRNA SufA6 bound to Codon CCC-G on the Ribosome

Classification:

RIBOSOME

Authors:

Maehigashi, T., Dunkle, J.A., Dunham, C.M.

Citation:

Structural insights into +1 frameshifting promoted by expanded or modification-deficient anticodon stem-loops
to be published pp. - 0

Experiment:

X-RAY DIFFRACTION Resolution:3.44Å R work:0.243R free:0.284

Equivalence Class: 

NR_all_42982.31 

Eq. Class Rep:

1FJG

NDB ID:

NA2561

PDB ID:

4KX0 

Release:

2014-08-06

Title:

Crystal Structure of Frameshift Suppressor tRNA SufA6 bound to Codon CCC-G on the Ribosome

Classification:

RIBOSOME

Authors:

Maehigashi, T., Dunkle, J.A., Dunham, C.M.

Citation:

Structural insights into +1 frameshifting promoted by expanded or modification-deficient anticodon stem-loops
to be published pp. - 0

Experiment:

X-RAY DIFFRACTION Resolution:3.44Å R work:0.243R free:0.284

Equivalence Class: 

NR_all_86444.20 

Eq. Class Rep:

4QCN

NDB ID:

NA2562

PDB ID:

4KX1 

Release:

2014-08-06

Title:

Crystal Structure of Frameshift Suppressor tRNA SufA6 bound to Codon CCC-G on the Ribosome

Classification:

RIBOSOME

Authors:

Maehigashi, T., Dunkle, J.A., Dunham, C.M.

Citation:

Structural insights into +1 frameshifting promoted by expanded or modification-deficient anticodon stem-loops
to be published pp. - 0

Experiment:

X-RAY DIFFRACTION Resolution:3.44Å R work:0.243R free:0.284

Equivalence Class: 

NR_all_42982.31 

Eq. Class Rep:

1FJG

NDB ID:

NA2563

PDB ID:

4KX2 

Release:

2014-08-06

Title:

Crystal Structure of Frameshift Suppressor tRNA SufA6 bound to Codon CCC-G on the Ribosome

Classification:

RIBOSOME

Authors:

Maehigashi, T., Dunkle, J.A., Dunham, C.M.

Citation:

Structural insights into +1 frameshifting promoted by expanded or modification-deficient anticodon stem-loops
to be published pp. - 0

Experiment:

X-RAY DIFFRACTION Resolution:3.44Å R work:0.243R free:0.284

Equivalence Class: 

NR_all_86444.20 

Eq. Class Rep:

4QCN

NDB ID:

NA2572

PDB ID:

1VVL 

Release:

2014-08-06

Title:

Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-U on the Ribosome

Classification:

RIBOSOME

Authors:

Maehigashi, T., Dunkle, J.A., Dunham, C.M.

Citation:

Structural insights into +1 frameshifting promoted by expanded or modification-deficient anticodon stem-loops
to be published pp. - 0

Experiment:

X-RAY DIFFRACTION Resolution:3.22Å R work:0.229R free:0.259

Equivalence Class: 

NR_all_42982.31 

Eq. Class Rep:

1FJG

NDB ID:

NA2573

PDB ID:

1VVM 

Release:

2014-08-06

Title:

Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-U on the Ribosome

Classification:

RIBOSOME

Authors:

Maehigashi, T., Dunkle, J.A., Dunham, C.M.

Citation:

Structural insights into +1 frameshifting promoted by expanded or modification-deficient anticodon stem-loops
to be published pp. - 0

Experiment:

X-RAY DIFFRACTION Resolution:3.22Å R work:0.229R free:0.259

Equivalence Class: 

NR_all_86444.20 

Eq. Class Rep:

4QCN

NDB ID:

NA2574

PDB ID:

1VVN 

Release:

2014-08-06

Title:

Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-U on the Ribosome

Classification:

RIBOSOME

Authors:

Maehigashi, T., Dunkle, J.A., Dunham, C.M.

Citation:

Structural insights into +1 frameshifting promoted by expanded or modification-deficient anticodon stem-loops
to be published pp. - 0

Experiment:

X-RAY DIFFRACTION Resolution:3.22Å R work:0.229R free:0.259

Equivalence Class: 

NR_all_42982.31 

Eq. Class Rep:

1FJG

NDB ID:

NA2575

PDB ID:

1VVO 

Release:

2014-08-06

Title:

Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-U on the Ribosome

Classification:

RIBOSOME

Authors:

Maehigashi, T., Dunkle, J.A., Dunham, C.M.

Citation:

Structural insights into +1 frameshifting promoted by expanded or modification-deficient anticodon stem-loops
to be published pp. - 0

Experiment:

X-RAY DIFFRACTION Resolution:3.22Å R work:0.229R free:0.259

Equivalence Class: 

NR_all_86444.20 

Eq. Class Rep:

4QCN

NDB ID:

NA2576

PDB ID:

1VVP 

Release:

2014-08-06

Title:

Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-A on the Ribosome

Classification:

RIBOSOME

Authors:

Maehigashi, T., Dunkle, J.A., Miles, S.J., Dunham, C.M.

Citation:

Structural insights into +1 frameshifting promoted by expanded or modification-deficient anticodon stem-loops
to be published pp. - 0

Experiment:

X-RAY DIFFRACTION Resolution:3.9Å R work:0.235R free:0.278

Equivalence Class: 

NR_all_42982.31 

Eq. Class Rep:

1FJG

NDB ID:

NA2577

PDB ID:

1VVQ 

Release:

2014-08-06

Title:

Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-A on the Ribosome

Classification:

RIBOSOME

Authors:

Maehigashi, T., Dunkle, J.A., Miles, S.J., Dunham, C.M.

Citation:

Structural insights into +1 frameshifting promoted by expanded or modification-deficient anticodon stem-loops
to be published pp. - 0

Experiment:

X-RAY DIFFRACTION Resolution:3.9Å R work:0.235R free:0.278

Equivalence Class: 

NR_all_86444.20 

Eq. Class Rep:

4QCN

NDB ID:

NA2578

PDB ID:

1VVR 

Release:

2014-08-06

Title:

Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-A on the Ribosome

Classification:

RIBOSOME

Authors:

Maehigashi, T., Dunkle, J.A., Miles, S.J., Dunham, C.M.

Citation:

Structural insights into +1 frameshifting promoted by expanded or modification-deficient anticodon stem-loops
to be published pp. - 0

Experiment:

X-RAY DIFFRACTION Resolution:3.9Å R work:0.235R free:0.278

Equivalence Class: 

NR_all_42982.31 

Eq. Class Rep:

1FJG

NDB ID:

NA2579

PDB ID:

1VVS 

Release:

2014-08-06

Title:

Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-A on the Ribosome

Classification:

RIBOSOME

Authors:

Maehigashi, T., Dunkle, J.A., Miles, S.J., Dunham, C.M.

Citation:

Structural insights into +1 frameshifting promoted by expanded or modification-deficient anticodon stem-loops
to be published pp. - 0

Experiment:

X-RAY DIFFRACTION Resolution:3.9Å R work:0.235R free:0.278

Equivalence Class: 

NR_all_86444.20 

Eq. Class Rep:

4QCN

NDB ID:

NA2582

PDB ID:

1VVT 

Release:

2014-08-06

Title:

Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCG-G on the Ribosome

Classification:

RIBOSOME

Authors:

Maehigashi, T., Dunkle, J.A., Miles, S.J., Dunham, C.M.

Citation:

Structural insights into +1 frameshifting promoted by expanded or modification-deficient anticodon stem-loops
to be published pp. - 0

Experiment:

X-RAY DIFFRACTION Resolution:3.9Å R work:0.251R free:0.297

Equivalence Class: 

NR_all_42982.31 

Eq. Class Rep:

1FJG

NDB ID:

NA2583

PDB ID:

1VVU 

Release:

2014-08-06

Title:

Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCG-G on the Ribosome

Classification:

RIBOSOME

Authors:

Maehigashi, T., Dunkle, J.A., Miles, S.J., Dunham, C.M.

Citation:

Structural insights into +1 frameshifting promoted by expanded or modification-deficient anticodon stem-loops
to be published pp. - 0

Experiment:

X-RAY DIFFRACTION Resolution:3.9Å R work:0.251R free:0.297

Equivalence Class: 

NR_all_86444.20 

Eq. Class Rep:

4QCN

NDB ID:

NA2584

PDB ID:

1VVV 

Release:

2014-08-06

Title:

Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCG-G on the Ribosome

Classification:

RIBOSOME

Authors:

Maehigashi, T., Dunkle, J.A., Miles, S.J., Dunham, C.M.

Citation:

Structural insights into +1 frameshifting promoted by expanded or modification-deficient anticodon stem-loops
to be published pp. - 0

Experiment:

X-RAY DIFFRACTION Resolution:3.9Å R work:0.251R free:0.297

Equivalence Class: 

NR_all_42982.31 

Eq. Class Rep:

1FJG

NDB ID:

NA2585

PDB ID:

1VVW 

Release:

2014-08-06

Title:

Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCG-G on the Ribosome

Classification:

RIBOSOME

Authors:

Maehigashi, T., Dunkle, J.A., Miles, S.J., Dunham, C.M.

Citation:

Structural insights into +1 frameshifting promoted by expanded or modification-deficient anticodon stem-loops
to be published pp. - 0

Experiment:

X-RAY DIFFRACTION Resolution:3.9Å R work:0.251R free:0.297

Equivalence Class: 

NR_all_86444.20 

Eq. Class Rep:

4QCN

NDB ID:

NA3045

PDB ID:

4QK8 

Release:

2014-08-06

Title:

Thermoanaerobacter pseudethanolicus c-di-AMP riboswitch

Classification:

RNA

Authors:

Gao, A., Serganov, A.

Citation:

Structural insights into recognition of c-di-AMP by the ydaO riboswitch.
Nat.Chem.Biol. pp. - 2014

Experiment:

X-RAY DIFFRACTION Resolution:3.05Å R work:0.181R free:0.194

Equivalence Class: 

NR_all_10790.1 

Eq. Class Rep:

4QK8

NDB ID:

NA3046

PDB ID:

4QK9 

Release:

2014-08-06

Title:

Thermovirga lienii c-di-AMP riboswitch

Classification:

RNA

Authors:

Gao, A., Serganov, A.

Citation:

Structural insights into recognition of c-di-AMP by the ydaO riboswitch.
Nat.Chem.Biol. pp. - 2014

Experiment:

X-RAY DIFFRACTION Resolution:3.05Å R work:0.181R free:0.224

Equivalence Class: 

NR_all_59468.1 

Eq. Class Rep:

4QK9

NDB ID:

NA3047

PDB ID:

4QKA 

Release:

2014-08-06

Title:

c-di-AMP riboswitch from Thermoanaerobacter pseudethanolicus, iridium hexamine soak

Classification:

RNA

Authors:

Gao, A., Serganov, A.

Citation:

Structural insights into recognition of c-di-AMP by the ydaO riboswitch.
Nat.Chem.Biol. pp. - 2014

Experiment:

X-RAY DIFFRACTION Resolution:3.2Å R work:0.171R free:0.196

Equivalence Class: 

NR_all_10790.1 

Eq. Class Rep:

4QK8

NDB ID:

NA3087

PDB ID:

1VVX 

Release:

2014-08-06

Title:

Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-U in the Absence of Paromomycin

Classification:

RIBOSOME

Authors:

Maehigashi, T., Dunkle, J.A., Miles, S.J., Dunham, C.M.

Citation:

Structural insights into +1 frameshifting promoted by expanded or modification-deficient anticodon stem-loops
to be published pp. - 0

Experiment:

X-RAY DIFFRACTION Resolution:3.92Å R work:0.207R free:0.265

Equivalence Class: 

NR_all_42982.31 

Eq. Class Rep:

1FJG

NDB ID:

NA3088

PDB ID:

1VVY 

Release:

2014-08-06

Title:

Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-U in the Absence of Paromomycin

Classification:

RIBOSOME

Authors:

Maehigashi, T., Dunkle, J.A., Miles, S.J., Dunham, C.M.

Citation:

Structural insights into +1 frameshifting promoted by expanded or modification-deficient anticodon stem-loops
to be published pp. - 0

Experiment:

X-RAY DIFFRACTION Resolution:3.92Å R work:0.207R free:0.265

Equivalence Class: 

NR_all_86444.20 

Eq. Class Rep:

4QCN

NDB ID:

NA3089

PDB ID:

1VVZ 

Release:

2014-08-06

Title:

Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-U in the Absence of Paromomycin

Classification:

RIBOSOME

Authors:

Maehigashi, T., Dunkle, J.A., Miles, S.J., Dunham, C.M.

Citation:

Structural insights into +1 frameshifting promoted by expanded or modification-deficient anticodon stem-loops
to be published pp. - 0

Experiment:

X-RAY DIFFRACTION Resolution:3.92Å R work:0.207R free:0.265

Equivalence Class: 

NR_all_42982.31 

Eq. Class Rep:

1FJG