A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 19-Sep-2018 number of released structures: 9779
Search for released structures

RNA Search Options:

Polymer

All
RNA Only
Protein RNA Complexes
Drug RNA Complexes
Hybrids and Chimera
Peptide Nucleic Acid / Mimetics

RNA Type

All
tRNA
tRNA fragment
Ribosome
Ribozyme
Hairpin Ribozyme
Hammerhead Ribozyme
Group I intron Ribozyme
Group II intron Ribozyme
Rnase P Ribozyme
Polymerase Ribozyme
Ligase Ribozyme
Leadzyme
Ribozyme fragment
Virus
Viral fragment
Riboswitch
Riboswitch fragment
Aptamer
Telomerase RNA
Small nucleotide fragments
Double Helices
Triple Helices
Quadruple Helices

Protein Function

All
Enzymes
Structural
Regulatory

Experimental Method

All
XRAY
NMR

Representative RNA 3D Structure Sets

All RNA Structures
Representative sets of RNA-containing 3D structures
Resolution cutoff:

Text Search

Filter results by text search

Use this option to narrow your results down considerably (>50% reduction) using any word seen in the results page. Eg: Any author name found in the right side



Polymer Type: All + RNA Type: All + Protein Function: All + Experimental Method: All + RNA Sequence Type: All RNA Sequence

Results: 4783  Download results as an excel file       Gallery view

NDB ID:

6D2Z

PDB ID:

6D2Z 

Release:

2018-09-05

Title:

Structure of human Usb1 with uridine-adenosine, inactive H208Q mutant

Classification:

HYDROLASE/RNA

Authors:

Nomura, Y., Montemayor, E.J., Butcher, S.E.

Citation:

Structural basis for preferential deadenylation of U6 RNA by Usb1
To Be Published pp. - 0

Experiment:

X-RAY DIFFRACTION Resolution:1.18Å R work:0.145R free:0.173

Equivalence Class: 

NR_all_88935.1 

Eq. Class Rep:

6D2Z

NDB ID:

6D30

PDB ID:

6D30 

Release:

2018-09-05

Title:

Structure of human Usb1 with uridine-uridine, inactive H208Q mutant

Classification:

HYDROLASE/RNA

Authors:

Nomura, Y., Montemayor, E.J., Butcher, S.E.

Citation:

Structural basis for preferential deadenylation of U6 RNA by Usb1
To Be Published pp. - 0

Experiment:

X-RAY DIFFRACTION Resolution:1.17Å R work:0.149R free:0.171

Equivalence Class: 

NR_all_21736.5 

Eq. Class Rep:

6D30

NDB ID:

6DN1

PDB ID:

6DN1 

Release:

2018-09-05

Title:

CRYSTAL STRUCTURE OF THE FMN RIBOSWITCH BOUND TO BRX1151 SPLIT RNA

Classification:

RNA

Authors:

Vicens, Q., Mondragon, E., Reyes, F.E., Coish, P., Aristoff, P., Berman, J., Kaur, H., Kells, K.W., Wickens, P., Wilson, J., Gadwood, R.C., Schostarez, H.J., Suto, R.K., Blount, K.F., Batey, R.T.

Citation:

Structure-activity relationship of flavin analogs that target the FMN riboswitch.
ACS Chem. Biol. pp. - 2018

Experiment:

X-RAY DIFFRACTION Resolution:3.03Å R work:0.223R free:0.241

Equivalence Class: 

NR_all_75133.1 

Eq. Class Rep:

6DN2

NDB ID:

6DN2

PDB ID:

6DN2 

Release:

2018-09-05

Title:

CRYSTAL STRUCTURE OF THE FMN RIBOSWITCH BOUND TO BRX1354 SPLIT RNA

Classification:

RNA

Authors:

Vicens, Q., Mondragon, E., Reyes, F.E., Coish, P., Aristoff, P., Berman, J., Kaur, H., Kells, K.W., Wickens, P., Wilson, J., Gadwood, R.C., Schostarez, H.J., Suto, R.K., Blount, K.F., Batey, R.T.

Citation:

Structure-activity relationship of flavin analogs that target the FMN riboswitch.
ACS Chem. Biol. pp. - 2018

Experiment:

X-RAY DIFFRACTION Resolution:2.88Å R work:0.199R free:0.256

Equivalence Class: 

NR_all_75133.1 

Eq. Class Rep:

6DN2

NDB ID:

6DN3

PDB ID:

6DN3 

Release:

2018-09-05

Title:

CRYSTAL STRUCTURE OF THE FMN RIBOSWITCH BOUND TO BRX1555 SPLIT RNA

Classification:

RNA

Authors:

Vicens, Q., Mondragon, E., Reyes, F.E., Coish, P., Aristoff, P., Berman, J., Kaur, H., Kells, K.W., Wickens, P., Wilson, J., Gadwood, R.C., Schostarez, H.J., Suto, R.K., Blount, K.F., Batey, R.T.

Citation:

Structure-activity relationship of flavin analogs that target the FMN riboswitch.
ACS Chem. Biol. pp. - 2018

Experiment:

X-RAY DIFFRACTION Resolution:2.8Å R work:0.193R free:0.229

Equivalence Class: 

NR_all_75133.1 

Eq. Class Rep:

6DN2

NDB ID:

6DUQ

PDB ID:

6DUQ 

Release:

2018-09-05

Title:

Structure of a Rho-NusG KOW domain complex

Classification:

TRANSCRIPTION/RNA

Authors:

Lawson, M.R., Ma, W., Bellecourt, M.J., Artsimovitch, I., Martin, A., Landick, R., Schulten, K., Berger, J.M.

Citation:

Mechanism for the Regulated Control of Bacterial Transcription Termination by a Universal Adaptor Protein.
Mol. Cell pp. - 2018

Experiment:

X-RAY DIFFRACTION Resolution:3.7Å R work:0.287R free:0.3

Equivalence Class: 

NR_all_47149.1 

Eq. Class Rep:

6DUQ

NDB ID:

6DUQ

PDB ID:

6DUQ 

Release:

2018-09-05

Title:

Structure of a Rho-NusG KOW domain complex

Classification:

TRANSCRIPTION/RNA

Authors:

Lawson, M.R., Ma, W., Bellecourt, M.J., Artsimovitch, I., Martin, A., Landick, R., Schulten, K., Berger, J.M.

Citation:

Mechanism for the Regulated Control of Bacterial Transcription Termination by a Universal Adaptor Protein.
Mol. Cell pp. - 2018

Experiment:

X-RAY DIFFRACTION Resolution:3.7Å R work:0.287R free:0.3

Equivalence Class: 

NR_all_82725.1 

Eq. Class Rep:

6DUQ

NDB ID:

6FQR

PDB ID:

6FQR 

Release:

2018-09-05

Title:

Crystal structure of IMP3 RRM12 in complex with RNA (CCCC)

Classification:

RNA BINDING PROTEIN

Authors:

Jia, M., Gut, H., Chao, J.A.

Citation:

Structural basis of IMP3 RRM12 recognition of RNA.
RNA pp. - 2018

Experiment:

X-RAY DIFFRACTION Resolution:2.1Å R work:0.166R free:0.229

Equivalence Class: 

NR_all_19855.1 

Eq. Class Rep:

6FQR

NDB ID:

6GX6

PDB ID:

6GX6 

Release:

2018-09-05

Title:

Crystal structure of IMP3 RRM12 in complex with RNA (ACAC)

Classification:

RNA BINDING PROTEIN

Authors:

Jia, M., Gut, H., Chao, J.A.

Citation:

Structural basis of IMP3 RRM12 recognition of RNA.
RNA pp. - 2018

Experiment:

X-RAY DIFFRACTION Resolution:2.0Å R work:0.18R free:0.235

Equivalence Class: 

NR_all_98524.1 

Eq. Class Rep:

6GX6

NDB ID:

6CVO

PDB ID:

6CVO 

Release:

2018-08-29

Title:

Human Aprataxin (Aptx) bound to nicked RNA-DNA, AMP and Zn product complex

Classification:

HYDROLASE/DNA/RNA

Authors:

Tumbale, P., Schellenberg, M.J., Mueller, G.A., Fairweather, E., Watson, M., Little, J.N., Krahn, J., Waddell, I., London, R.E., Williams, R.S.

Citation:

Mechanism of APTX nicked DNA sensing and pleiotropic inactivation in neurodegenerative disease.
EMBO J. 37 pp. - 2018

Experiment:

X-RAY DIFFRACTION Resolution:2.4Å R work:0.183R free:0.222

NDB ID:

6CXZ

PDB ID:

6CXZ 

Release:

2018-08-29

Title:

RNA octamer containing 2'-F, 4'-Calpha-Me U.

Classification:

RNA

Authors:

Harp, J.M., Guenther, D.C., Bisbe, A., Perkins, L., Matsuda, S., Bommineni, G.R., Zlatev, I., Foster, D.J., Taneja, N., Charisse, K., Maier, M.A., Rajeev, K.G., Manoharan, M., Egli, M.

Citation:

Structural basis for the synergy of 4'- and 2'-modifications on siRNA nuclease resistance, thermal stability and RNAi activity.
Nucleic Acids Res. pp. - 2018

Experiment:

X-RAY DIFFRACTION Resolution:1.5Å R work:0.186R free:0.215

Equivalence Class: 

NR_all_86375.1 

Eq. Class Rep:

6CXZ

NDB ID:

6CY0

PDB ID:

6CY0 

Release:

2018-08-29

Title:

RNA octamer containing 2'-F, 4'-Cbeta-OMe U.

Classification:

RNA

Authors:

Harp, J.M., Guenther, D.C., Bisbe, A., Perkins, L., Matsuda, S., Bommineni, G.R., Zlatev, I., Foster, D.J., Taneja, N., Charisse, K., Maier, M.A., Rajeev, K.G., Manoharan, M., Egli, M.

Citation:

Structural basis for the synergy of 4'- and 2'-modifications on siRNA nuclease resistance, thermal stability and RNAi activity.
Nucleic Acids Res. pp. - 2018

Experiment:

X-RAY DIFFRACTION Resolution:2.398Å R work:0.202R free:0.242

Equivalence Class: 

NR_all_73564.1 

Eq. Class Rep:

6CY4

NDB ID:

6CY2

PDB ID:

6CY2 

Release:

2018-08-29

Title:

RNA octamer containing 2'-OMe, 4'Calpha-OMe U.

Classification:

RNA

Authors:

Harp, J.M., Guenther, D.C., Bisbe, A., Perkins, L., Matsuda, S., Bommineni, G.R., Zlatev, I., Foster, D.J., Taneja, N., Charisse, K., Maier, M.A., Rajeev, K.G., Manoharan, M., Egli, M.

Citation:

Structural basis for the synergy of 4'- and 2'-modifications on siRNA nuclease resistance, thermal stability and RNAi activity.
Nucleic Acids Res. pp. - 2018

Experiment:

X-RAY DIFFRACTION Resolution:1.4Å R work:0.184R free:0.205

Equivalence Class: 

NR_all_31969.1 

Eq. Class Rep:

6CY2

NDB ID:

6CY4

PDB ID:

6CY4 

Release:

2018-08-29

Title:

RNA octamer containing 2'-OMe, 4'- Cbeta-OMe U.

Classification:

RNA

Authors:

Harp, J.M., Guenther, D.C., Bisbe, A., Perkins, L., Matsuda, S., Bommineni, G.R., Zlatev, I., Foster, D.J., Taneja, N., Charisse, K., Maier, M.A., Rajeev, K.G., Manoharan, M., Egli, M.

Citation:

Structural basis for the synergy of 4'- and 2'-modifications on siRNA nuclease resistance, thermal stability and RNAi activity.
Nucleic Acids Res. pp. - 2018

Experiment:

X-RAY DIFFRACTION Resolution:1.851Å R work:0.226R free:0.231

Equivalence Class: 

NR_all_07963.1 

Eq. Class Rep:

6CY4

NDB ID:

6CY4

PDB ID:

6CY4 

Release:

2018-08-29

Title:

RNA octamer containing 2'-OMe, 4'- Cbeta-OMe U.

Classification:

RNA

Authors:

Harp, J.M., Guenther, D.C., Bisbe, A., Perkins, L., Matsuda, S., Bommineni, G.R., Zlatev, I., Foster, D.J., Taneja, N., Charisse, K., Maier, M.A., Rajeev, K.G., Manoharan, M., Egli, M.

Citation:

Structural basis for the synergy of 4'- and 2'-modifications on siRNA nuclease resistance, thermal stability and RNAi activity.
Nucleic Acids Res. pp. - 2018

Experiment:

X-RAY DIFFRACTION Resolution:1.851Å R work:0.226R free:0.231

Equivalence Class: 

NR_all_44426.1 

Eq. Class Rep:

6CY4

NDB ID:

6CY4

PDB ID:

6CY4 

Release:

2018-08-29

Title:

RNA octamer containing 2'-OMe, 4'- Cbeta-OMe U.

Classification:

RNA

Authors:

Harp, J.M., Guenther, D.C., Bisbe, A., Perkins, L., Matsuda, S., Bommineni, G.R., Zlatev, I., Foster, D.J., Taneja, N., Charisse, K., Maier, M.A., Rajeev, K.G., Manoharan, M., Egli, M.

Citation:

Structural basis for the synergy of 4'- and 2'-modifications on siRNA nuclease resistance, thermal stability and RNAi activity.
Nucleic Acids Res. pp. - 2018

Experiment:

X-RAY DIFFRACTION Resolution:1.851Å R work:0.226R free:0.231

Equivalence Class: 

NR_all_73564.1 

Eq. Class Rep:

6CY4

NDB ID:

6DOI

PDB ID:

6DOI 

Release:

2018-08-22

Title:

Crystal Structure of Bacillus Halodurans Ribonuclease H1 in Complex with an RNA/DNA Hybrid (1.54 Angstrom wavelength): Soak in 0.5 mM EGTA and 200 mM K+ at 21 C

Classification:

HYDROLASE/RNA/DNA

Authors:

Samara, N.L., Yang, W.

Citation:

Cation trafficking propels RNA hydrolysis.
Nat. Struct. Mol. Biol. 25 pp.715 - 721 2018

Experiment:

X-RAY DIFFRACTION Resolution:1.948Å R work:0.146R free:0.195

Equivalence Class: 

NR_all_08576.2 

Eq. Class Rep:

6DO8

NDB ID:

6DOI

PDB ID:

6DOI 

Release:

2018-08-22

Title:

Crystal Structure of Bacillus Halodurans Ribonuclease H1 in Complex with an RNA/DNA Hybrid (1.54 Angstrom wavelength): Soak in 0.5 mM EGTA and 200 mM K+ at 21 C

Classification:

HYDROLASE/RNA/DNA

Authors:

Samara, N.L., Yang, W.

Citation:

Cation trafficking propels RNA hydrolysis.
Nat. Struct. Mol. Biol. 25 pp.715 - 721 2018

Experiment:

X-RAY DIFFRACTION Resolution:1.948Å R work:0.146R free:0.195

Equivalence Class: 

NR_all_23205.2 

Eq. Class Rep:

6DO8

NDB ID:

6GYV

PDB ID:

6GYV 

Release:

2018-08-22

Title:

Lariat-capping ribozyme (circular permutation form)

Classification:

RNA

Authors:

Meyer, M., Nielsen, H., Olieric, V., Roblin, P., Johansen, S.D., Westhof, E., Masquida, B.

Citation:

Speciation of a group I intron into a lariat capping ribozyme.
Proc. Natl. Acad. Sci. U.S.A. 111 pp.7659 - 7664 2014

Experiment:

SOLUTION SCATTERING Resolution:2.50004Å R work:0.198R free:0.244

Equivalence Class: 

NR_all_57460.2 

Eq. Class Rep:

4P95

NDB ID:

6GYV

PDB ID:

6GYV 

Release:

2018-08-22

Title:

Lariat-capping ribozyme (circular permutation form)

Classification:

RNA

Authors:

Meyer, M., Nielsen, H., Olieric, V., Roblin, P., Johansen, S.D., Westhof, E., Masquida, B.

Citation:

Speciation of a group I intron into a lariat capping ribozyme.
Proc. Natl. Acad. Sci. U.S.A. 111 pp.7659 - 7664 2014

Experiment:

X-RAY DIFFRACTION Resolution:2.50004Å R work:0.198R free:0.244

Equivalence Class: 

NR_all_57460.2 

Eq. Class Rep:

4P95

NDB ID:

5Z98

PDB ID:

5Z98 

Release:

2018-08-15

Title:

Crystal Structure of the Primate APOBEC3H Dimer mediated by RNA Duplex

Classification:

ANTIVIRAL PROTEIN/RNA

Authors:

Matsuoka, T., Nagae, T., Ode, H., Awazu, H., Kurosawa, T., Hamano, A., Matsuoka, K., Hachiya, A., Imahashi, M., Yokomaku, Y., Watanabe, N., Iwatani, Y.

Citation:

Structural basis of chimpanzee APOBEC3H dimerization stabilized by double-stranded RNA.
Nucleic Acids Res. pp. - 2018

Experiment:

X-RAY DIFFRACTION Resolution:2.2Å R work:0.251R free:0.32

Equivalence Class: 

NR_all_30582.1 

Eq. Class Rep:

5Z98

NDB ID:

5Z98

PDB ID:

5Z98 

Release:

2018-08-15

Title:

Crystal Structure of the Primate APOBEC3H Dimer mediated by RNA Duplex

Classification:

ANTIVIRAL PROTEIN/RNA

Authors:

Matsuoka, T., Nagae, T., Ode, H., Awazu, H., Kurosawa, T., Hamano, A., Matsuoka, K., Hachiya, A., Imahashi, M., Yokomaku, Y., Watanabe, N., Iwatani, Y.

Citation:

Structural basis of chimpanzee APOBEC3H dimerization stabilized by double-stranded RNA.
Nucleic Acids Res. pp. - 2018

Experiment:

X-RAY DIFFRACTION Resolution:2.2Å R work:0.251R free:0.32

Equivalence Class: 

NR_all_85489.1 

Eq. Class Rep:

5Z98

NDB ID:

6DMN

PDB ID:

6DMN 

Release:

2018-08-15

Title:

Crystal Structure of Bacillus Halodurans Ribonuclease H1 in Complex with an RNA/DNA Hybrid: Soaked in 2 mM Ca2+ and 200 mM K+ at 21 C

Classification:

hydrolase/dna/rna

Authors:

Samara, N.L., Yang, W.

Citation:

Cation trafficking propels RNA hydrolysis.
Nat. Struct. Mol. Biol. 25 pp.715 - 721 2018

Experiment:

X-RAY DIFFRACTION Resolution:1.27Å R work:0.15R free:0.171

Equivalence Class: 

NR_all_08576.2 

Eq. Class Rep:

6DO8

NDB ID:

6DMN

PDB ID:

6DMN 

Release:

2018-08-15

Title:

Crystal Structure of Bacillus Halodurans Ribonuclease H1 in Complex with an RNA/DNA Hybrid: Soaked in 2 mM Ca2+ and 200 mM K+ at 21 C

Classification:

hydrolase/dna/rna

Authors:

Samara, N.L., Yang, W.

Citation:

Cation trafficking propels RNA hydrolysis.
Nat. Struct. Mol. Biol. 25 pp.715 - 721 2018

Experiment:

X-RAY DIFFRACTION Resolution:1.27Å R work:0.15R free:0.171

Equivalence Class: 

NR_all_23205.2 

Eq. Class Rep:

6DO8

NDB ID:

6DMV

PDB ID:

6DMV 

Release:

2018-08-15

Title:

Crystal Structure of Bacillus Halodurans Ribonuclease H1 in Complex with an RNA/DNA Hybrid: Soaked for 40 s in 2 mM Mg2+ and 200 mM K+ at 21 C

Classification:

hydrolase/dna/rna

Authors:

Samara, N.L., Yang, W.

Citation:

Cation trafficking propels RNA hydrolysis.
Nat. Struct. Mol. Biol. 25 pp.715 - 721 2018

Experiment:

X-RAY DIFFRACTION Resolution:1.52Å R work:0.161R free:0.181

Equivalence Class: 

NR_all_08576.2 

Eq. Class Rep:

6DO8

NDB ID:

6DMV

PDB ID:

6DMV 

Release:

2018-08-15

Title:

Crystal Structure of Bacillus Halodurans Ribonuclease H1 in Complex with an RNA/DNA Hybrid: Soaked for 40 s in 2 mM Mg2+ and 200 mM K+ at 21 C

Classification:

hydrolase/dna/rna

Authors:

Samara, N.L., Yang, W.

Citation:

Cation trafficking propels RNA hydrolysis.
Nat. Struct. Mol. Biol. 25 pp.715 - 721 2018

Experiment:

X-RAY DIFFRACTION Resolution:1.52Å R work:0.161R free:0.181

Equivalence Class: 

NR_all_23205.2 

Eq. Class Rep:

6DO8

NDB ID:

6DO8

PDB ID:

6DO8 

Release:

2018-08-15

Title:

Crystal Structure of Bacillus Halodurans Ribonuclease H1 in Complex with an RNA/DNA Hybrid: Reaction in 2 mM Mg2+ and 200 mM K+ for 80 s at 21 C

Classification:

hydrolase/dna/rna

Authors:

Samara, N.L., Yang, W.

Citation:

Cation trafficking propels RNA hydrolysis.
Nat. Struct. Mol. Biol. 25 pp.715 - 721 2018

Experiment:

X-RAY DIFFRACTION Resolution:1.414Å R work:0.149R free:0.168

Equivalence Class: 

NR_all_08576.2 

Eq. Class Rep:

6DO8

NDB ID:

6DO8

PDB ID:

6DO8 

Release:

2018-08-15

Title:

Crystal Structure of Bacillus Halodurans Ribonuclease H1 in Complex with an RNA/DNA Hybrid: Reaction in 2 mM Mg2+ and 200 mM K+ for 80 s at 21 C

Classification:

hydrolase/dna/rna

Authors:

Samara, N.L., Yang, W.

Citation:

Cation trafficking propels RNA hydrolysis.
Nat. Struct. Mol. Biol. 25 pp.715 - 721 2018

Experiment:

X-RAY DIFFRACTION Resolution:1.414Å R work:0.149R free:0.168

Equivalence Class: 

NR_all_23205.2 

Eq. Class Rep:

6DO8

NDB ID:

6DO9

PDB ID:

6DO9 

Release:

2018-08-15

Title:

Crystal Structure of Bacillus Halodurans Ribonuclease H1 in Complex with an RNA/DNA Hybrid: Reaction in 2 mM Mg2+ and 200 mM K+ for 120 s at 21 C

Classification:

hydrolase/dna/rna

Authors:

Samara, N.L., Yang, W.

Citation:

Cation trafficking propels RNA hydrolysis.
Nat. Struct. Mol. Biol. 25 pp.715 - 721 2018

Experiment:

X-RAY DIFFRACTION Resolution:1.36Å R work:0.153R free:0.175

Equivalence Class: 

NR_all_08576.2 

Eq. Class Rep:

6DO8

NDB ID:

6DO9

PDB ID:

6DO9 

Release:

2018-08-15

Title:

Crystal Structure of Bacillus Halodurans Ribonuclease H1 in Complex with an RNA/DNA Hybrid: Reaction in 2 mM Mg2+ and 200 mM K+ for 120 s at 21 C

Classification:

hydrolase/dna/rna

Authors:

Samara, N.L., Yang, W.

Citation:

Cation trafficking propels RNA hydrolysis.
Nat. Struct. Mol. Biol. 25 pp.715 - 721 2018

Experiment:

X-RAY DIFFRACTION Resolution:1.36Å R work:0.153R free:0.175

Equivalence Class: 

NR_all_23205.2 

Eq. Class Rep:

6DO8

NDB ID:

6DOA

PDB ID:

6DOA 

Release:

2018-08-15

Title:

Crystal Structure of Bacillus Halodurans Ribonuclease H1 in Complex with an RNA/DNA Hybrid: Reaction in 2 mM Mg2+ and 200 mM K+ for 480 s at 21 C

Classification:

hydrolase/dna/rna

Authors:

Samara, N.L., Yang, W.

Citation:

Cation trafficking propels RNA hydrolysis.
Nat. Struct. Mol. Biol. 25 pp.715 - 721 2018

Experiment:

X-RAY DIFFRACTION Resolution:1.474Å R work:0.159R free:0.186

Equivalence Class: 

NR_all_08576.2 

Eq. Class Rep:

6DO8

NDB ID:

6DOA

PDB ID:

6DOA 

Release:

2018-08-15

Title:

Crystal Structure of Bacillus Halodurans Ribonuclease H1 in Complex with an RNA/DNA Hybrid: Reaction in 2 mM Mg2+ and 200 mM K+ for 480 s at 21 C

Classification:

hydrolase/dna/rna

Authors:

Samara, N.L., Yang, W.

Citation:

Cation trafficking propels RNA hydrolysis.
Nat. Struct. Mol. Biol. 25 pp.715 - 721 2018

Experiment:

X-RAY DIFFRACTION Resolution:1.474Å R work:0.159R free:0.186

Equivalence Class: 

NR_all_23205.2 

Eq. Class Rep:

6DO8

NDB ID:

6DOB

PDB ID:

6DOB 

Release:

2018-08-15

Title:

Crystal Structure of Bacillus Halodurans Ribonuclease H1 in Complex with an RNA/DNA Hybrid: Reaction in 2 mM Mg2+ and 200 mM K+ for 200 s at 21 C

Classification:

hydrolase/dna/rna

Authors:

Samara, N.L., Yang, W.

Citation:

Cation trafficking propels RNA hydrolysis.
Nat. Struct. Mol. Biol. 25 pp.715 - 721 2018

Experiment:

X-RAY DIFFRACTION Resolution:1.343Å R work:0.168R free:0.195

Equivalence Class: 

NR_all_08576.2 

Eq. Class Rep:

6DO8

NDB ID:

6DOB

PDB ID:

6DOB 

Release:

2018-08-15

Title:

Crystal Structure of Bacillus Halodurans Ribonuclease H1 in Complex with an RNA/DNA Hybrid: Reaction in 2 mM Mg2+ and 200 mM K+ for 200 s at 21 C

Classification:

hydrolase/dna/rna

Authors:

Samara, N.L., Yang, W.

Citation:

Cation trafficking propels RNA hydrolysis.
Nat. Struct. Mol. Biol. 25 pp.715 - 721 2018

Experiment:

X-RAY DIFFRACTION Resolution:1.343Å R work:0.168R free:0.195

Equivalence Class: 

NR_all_23205.2 

Eq. Class Rep:

6DO8

NDB ID:

6DOC

PDB ID:

6DOC 

Release:

2018-08-15

Title:

Crystal Structure of Bacillus Halodurans Ribonuclease H1 in Complex with an RNA/DNA Hybrid: Reaction in 2 mM Mg2+ and 200 mM K+ for 240 s at 21 C

Classification:

hydrolase/dna/rna

Authors:

Samara, N.L., Yang, W.

Citation:

Cation trafficking propels RNA hydrolysis.
Nat. Struct. Mol. Biol. 25 pp.715 - 721 2018

Experiment:

X-RAY DIFFRACTION Resolution:1.496Å R work:0.188R free:0.221

Equivalence Class: 

NR_all_08576.2 

Eq. Class Rep:

6DO8

NDB ID:

6DOC

PDB ID:

6DOC 

Release:

2018-08-15

Title:

Crystal Structure of Bacillus Halodurans Ribonuclease H1 in Complex with an RNA/DNA Hybrid: Reaction in 2 mM Mg2+ and 200 mM K+ for 240 s at 21 C

Classification:

hydrolase/dna/rna

Authors:

Samara, N.L., Yang, W.

Citation:

Cation trafficking propels RNA hydrolysis.
Nat. Struct. Mol. Biol. 25 pp.715 - 721 2018

Experiment:

X-RAY DIFFRACTION Resolution:1.496Å R work:0.188R free:0.221

Equivalence Class: 

NR_all_23205.2 

Eq. Class Rep:

6DO8

NDB ID:

6DOD

PDB ID:

6DOD 

Release:

2018-08-15

Title:

Crystal Structure of Bacillus Halodurans Ribonuclease H1 in Complex with an RNA/DNA Hybrid: Reaction in 2 mM Mg2+ and 200 mM K+ for 360 s at 21 C

Classification:

hydrolase/dna/rna

Authors:

Samara, N.L., Yang, W.

Citation:

Cation trafficking propels RNA hydrolysis.
Nat. Struct. Mol. Biol. 25 pp.715 - 721 2018

Experiment:

X-RAY DIFFRACTION Resolution:1.535Å R work:0.16R free:0.194

Equivalence Class: 

NR_all_08576.2 

Eq. Class Rep:

6DO8

NDB ID:

6DOD

PDB ID:

6DOD 

Release:

2018-08-15

Title:

Crystal Structure of Bacillus Halodurans Ribonuclease H1 in Complex with an RNA/DNA Hybrid: Reaction in 2 mM Mg2+ and 200 mM K+ for 360 s at 21 C

Classification:

hydrolase/dna/rna

Authors:

Samara, N.L., Yang, W.

Citation:

Cation trafficking propels RNA hydrolysis.
Nat. Struct. Mol. Biol. 25 pp.715 - 721 2018

Experiment:

X-RAY DIFFRACTION Resolution:1.535Å R work:0.16R free:0.194

Equivalence Class: 

NR_all_23205.2 

Eq. Class Rep:

6DO8

NDB ID:

6DOE

PDB ID:

6DOE 

Release:

2018-08-15

Title:

Crystal Structure of Bacillus Halodurans Ribonuclease H1 in Complex with an RNA/DNA Hybrid: Reaction in 2 mM Mg2+ and 200 mM K+ for 420 s at 21 C

Classification:

hydrolase/dna/rna

Authors:

Samara, N.L., Yang, W.

Citation:

Cation trafficking propels RNA hydrolysis.
Nat. Struct. Mol. Biol. 25 pp.715 - 721 2018

Experiment:

X-RAY DIFFRACTION Resolution:1.451Å R work:0.17R free:0.198

Equivalence Class: 

NR_all_08576.2 

Eq. Class Rep:

6DO8

NDB ID:

6DOE

PDB ID:

6DOE 

Release:

2018-08-15

Title:

Crystal Structure of Bacillus Halodurans Ribonuclease H1 in Complex with an RNA/DNA Hybrid: Reaction in 2 mM Mg2+ and 200 mM K+ for 420 s at 21 C

Classification:

hydrolase/dna/rna

Authors:

Samara, N.L., Yang, W.

Citation:

Cation trafficking propels RNA hydrolysis.
Nat. Struct. Mol. Biol. 25 pp.715 - 721 2018

Experiment:

X-RAY DIFFRACTION Resolution:1.451Å R work:0.17R free:0.198

Equivalence Class: 

NR_all_23205.2 

Eq. Class Rep:

6DO8

NDB ID:

6DOF

PDB ID:

6DOF 

Release:

2018-08-15

Title:

Crystal Structure of Bacillus Halodurans Ribonuclease H1 in Complex with an RNA/DNA Hybrid: Reaction in 2 mM Mg2+ and 200 mM K+ for 540 s at 21 C

Classification:

hydrolase/dna/rna

Authors:

Samara, N.L., Yang, W.

Citation:

Cation trafficking propels RNA hydrolysis.
Nat. Struct. Mol. Biol. 25 pp.715 - 721 2018

Experiment:

X-RAY DIFFRACTION Resolution:1.433Å R work:0.161R free:0.186

Equivalence Class: 

NR_all_08576.2 

Eq. Class Rep:

6DO8

NDB ID:

6DOF

PDB ID:

6DOF 

Release:

2018-08-15

Title:

Crystal Structure of Bacillus Halodurans Ribonuclease H1 in Complex with an RNA/DNA Hybrid: Reaction in 2 mM Mg2+ and 200 mM K+ for 540 s at 21 C

Classification:

hydrolase/dna/rna

Authors:

Samara, N.L., Yang, W.

Citation:

Cation trafficking propels RNA hydrolysis.
Nat. Struct. Mol. Biol. 25 pp.715 - 721 2018

Experiment:

X-RAY DIFFRACTION Resolution:1.433Å R work:0.161R free:0.186

Equivalence Class: 

NR_all_23205.2 

Eq. Class Rep:

6DO8

NDB ID:

6DOG

PDB ID:

6DOG 

Release:

2018-08-15

Title:

Crystal Structure of Bacillus Halodurans Ribonuclease H1 in Complex with an RNA/DNA Hybrid: Reaction in 2 mM Mg2+ and 200 mM K+ for 600 s at 21 C

Classification:

hydrolase/rna/dna

Authors:

Samara, N.L., Yang, W.

Citation:

Cation trafficking propels RNA hydrolysis.
Nat. Struct. Mol. Biol. 25 pp.715 - 721 2018

Experiment:

X-RAY DIFFRACTION Resolution:1.285Å R work:0.16R free:0.183

Equivalence Class: 

NR_all_08576.2 

Eq. Class Rep:

6DO8

NDB ID:

6DOG

PDB ID:

6DOG 

Release:

2018-08-15

Title:

Crystal Structure of Bacillus Halodurans Ribonuclease H1 in Complex with an RNA/DNA Hybrid: Reaction in 2 mM Mg2+ and 200 mM K+ for 600 s at 21 C

Classification:

hydrolase/rna/dna

Authors:

Samara, N.L., Yang, W.

Citation:

Cation trafficking propels RNA hydrolysis.
Nat. Struct. Mol. Biol. 25 pp.715 - 721 2018

Experiment:

X-RAY DIFFRACTION Resolution:1.285Å R work:0.16R free:0.183

Equivalence Class: 

NR_all_23205.2 

Eq. Class Rep:

6DO8

NDB ID:

6DOH

PDB ID:

6DOH 

Release:

2018-08-15

Title:

Crystal Structure of Bacillus Halodurans Ribonuclease H1 in Complex with an RNA/DNA Hybrid: Soak in 0.5 mM EGTA and 200 mM K+ at 21 C

Classification:

HYDROLASE/RNA/DNA

Authors:

Samara, N.L., Yang, W.

Citation:

Cation trafficking propels RNA hydrolysis.
Nat. Struct. Mol. Biol. 25 pp.715 - 721 2018

Experiment:

X-RAY DIFFRACTION Resolution:1.363Å R work:0.167R free:0.2

Equivalence Class: 

NR_all_08576.2 

Eq. Class Rep:

6DO8

NDB ID:

6DOH

PDB ID:

6DOH 

Release:

2018-08-15

Title:

Crystal Structure of Bacillus Halodurans Ribonuclease H1 in Complex with an RNA/DNA Hybrid: Soak in 0.5 mM EGTA and 200 mM K+ at 21 C

Classification:

HYDROLASE/RNA/DNA

Authors:

Samara, N.L., Yang, W.

Citation:

Cation trafficking propels RNA hydrolysis.
Nat. Struct. Mol. Biol. 25 pp.715 - 721 2018

Experiment:

X-RAY DIFFRACTION Resolution:1.363Å R work:0.167R free:0.2

Equivalence Class: 

NR_all_23205.2 

Eq. Class Rep:

6DO8

NDB ID:

6DOJ

PDB ID:

6DOJ 

Release:

2018-08-15

Title:

Crystal Structure of Bacillus Halodurans Ribonuclease H1 in Complex with an RNA/DNA Hybrid: Reaction in 2 mM Mg2+ and 5 mM K+ for 120 s at 21 C

Classification:

HYDROLASE/DNA/RNA

Authors:

Samara, N.L., Yang, W.

Citation:

Cation trafficking propels RNA hydrolysis.
Nat. Struct. Mol. Biol. 25 pp.715 - 721 2018

Experiment:

X-RAY DIFFRACTION Resolution:1.403Å R work:0.144R free:0.184

Equivalence Class: 

NR_all_08576.2 

Eq. Class Rep:

6DO8

NDB ID:

6DOJ

PDB ID:

6DOJ 

Release:

2018-08-15

Title:

Crystal Structure of Bacillus Halodurans Ribonuclease H1 in Complex with an RNA/DNA Hybrid: Reaction in 2 mM Mg2+ and 5 mM K+ for 120 s at 21 C

Classification:

HYDROLASE/DNA/RNA

Authors:

Samara, N.L., Yang, W.

Citation:

Cation trafficking propels RNA hydrolysis.
Nat. Struct. Mol. Biol. 25 pp.715 - 721 2018

Experiment:

X-RAY DIFFRACTION Resolution:1.403Å R work:0.144R free:0.184

Equivalence Class: 

NR_all_23205.2 

Eq. Class Rep:

6DO8

NDB ID:

6DOK

PDB ID:

6DOK 

Release:

2018-08-15

Title:

Crystal Structure of Bacillus Halodurans Ribonuclease H1 in Complex with an RNA/DNA Hybrid: Reaction in 2 mM Mg2+ and 25 mM K+ for 120 s at 21 C (dataset 1)

Classification:

HYDROLASE/DNA/RNA

Authors:

Samara, N.L., Yang, W.

Citation:

Cation trafficking propels RNA hydrolysis.
Nat. Struct. Mol. Biol. 25 pp.715 - 721 2018

Experiment:

X-RAY DIFFRACTION Resolution:1.38Å R work:0.148R free:0.17

Equivalence Class: 

NR_all_08576.2 

Eq. Class Rep:

6DO8

NDB ID:

6DOK

PDB ID:

6DOK 

Release:

2018-08-15

Title:

Crystal Structure of Bacillus Halodurans Ribonuclease H1 in Complex with an RNA/DNA Hybrid: Reaction in 2 mM Mg2+ and 25 mM K+ for 120 s at 21 C (dataset 1)

Classification:

HYDROLASE/DNA/RNA

Authors:

Samara, N.L., Yang, W.

Citation:

Cation trafficking propels RNA hydrolysis.
Nat. Struct. Mol. Biol. 25 pp.715 - 721 2018

Experiment:

X-RAY DIFFRACTION Resolution:1.38Å R work:0.148R free:0.17

Equivalence Class: 

NR_all_23205.2 

Eq. Class Rep:

6DO8