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As of 4-Dec-2019 number of released structures: 10490
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NDB ID:
PD0034
PDB ID:
10MH
 
Base Pair Morphology Parameters
CSV Format
Model Number
Pair Number
Pair Name
Shear
Stretch
Stagger
Buckle
Propellor
Opening
1
6
B_5CM407:DG428_C
-0.481
-0.242
-0.471
7.538
-7.152
-3.941
1
3
B_DA404:DT431_C
0.06
-0.253
0.131
-6.138
5.849
0.604
1
10
B_DA412:DT423_C
0.544
-0.015
0.231
9.576
-8.778
-10.943
1
1
B_DC402:DG433_C
-0.021
-0.367
0.185
-12.031
-0.691
-5.002
1
2
B_DC403:DG432_C
0.379
-0.4
0.155
-1.12
-8.305
0.673
1
7
B_DC409:DG426_C
-0.384
0.027
-0.266
3.175
-5.454
-2.379
1
11
B_DC413:DG422_C
0.584
-0.449
0.294
3.277
-13.078
-0.646
1
5
B_DG406:DC429_C
0.327
-0.365
-0.035
7.195
-4.277
-7.468
1
9
B_DG411:DC424_C
-0.121
-0.352
-0.09
4.016
-1.283
-1.893
1
4
B_DT405:DA430_C
-0.154
0.109
-0.153
7.986
-4.182
-4.894
1
8
B_DT410:DA425_C
-0.156
-0.199
-0.01
1.144
-1.724
-1.648
The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures',
Nucleic Acids Res
.
31(17)
, 5108-21. Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures',
Nat Protoc
.
3(7)
, 1213-27.