143D: Base Pair Morphology Step Parameters

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NDB ID: 143D PDB ID: 143D

Base Pair Morphology Step Parameters

CSV Format

Model Number	Step Number	Step Name	Shift	Slide	Rise	Tilt	Roll	Twist	X-Displacement	Y-Displacement	Helical Rise	Inclination	Tip	Helical Twist
1	1	AA_DA1DG10:DG22DA13_AA	-1.526	0.723	3.561	-3.531	9.043	-111.262	-0.552	-0.967	3.484	-5.472	-2.136	-111.543
1	3	AA_DG2DG21:DG15DG14_AA	3.114	2.13	-2.005	22.621	-166.305	-45.669	-1.476	1.509	0.776	86.833	11.811	-168.792
1	2	AA_DG10DG2:DG14DG22_AA	1.649	3.268	0.487	-6.754	10.085	-177.365	-1.635	0.825	0.482	-5.044	-3.378	-177.38
1	5	AA_DG16DT6:DA19DG20_AA	1.364	-0.486	2.309	3.04	-16.788	-156.237	0.284	0.703	2.285	8.575	1.553	-156.504
1	4	AA_DG21DG16:DG20DG15_AA	1.798	3.01	0.204	-83.115	151.516	-124.446	-1.458	0.926	-0.645	-76.12	-41.756	-176.654

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.