A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 18-May-2022 number of released structures: 12082
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NDB ID: 170D  PDB ID: 170D 


Base Pair Morphology Parameters

CSV Format

Model NumberPair NumberPair NameShearStretchStaggerBucklePropellorOpening
19A_CAR9:DG16_B0.83-0.27-0.174-2.439-5.4572.983
15A_DA5:DT20_B0.7850.198-0.255-3.6143.25-6.57
16A_DA6:DT19_B0.769-0.004-0.5064.306-20.8050.44
11A_DC1:DG24_B0.627-0.252-0.565-5.74-3.383-0.631
13A_DC3:DG22_B0.2430.019-0.6352.239-11.443.3
111A_DC11:DG14_B-0.382-0.071-0.6090.194-7.4596.975
12A_DG2:DC23_B0.1780.101-0.593-0.157-7.4536.927
14A_DG4:CAR21_B-0.792-0.008-0.1552.482-5.2943.014
110A_DG10:DC15_B-0.317-0.233-0.635-2.216-11.2363.341
112A_DG12:DC13_B-0.877-0.297-0.4945.673-3.471-0.662
17A_DT7:DA18_B-0.51-0.066-0.492-4.273-20.9760.444
18A_DT8:DA17_B-0.6070.003-0.2793.6253.265-6.551

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.