1A0A: Base Pair Morphology Step Parameters

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As of 28-Sep-2022 number of released structures: 12311

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NDB ID: PDT046 PDB ID: 1A0A

Base Pair Morphology Step Parameters

CSV Format

Model Number	Step Number	Step Name	Shift	Slide	Rise	Tilt	Roll	Twist	X-Displacement	Y-Displacement	Helical Rise	Inclination	Tip	Helical Twist
1	4	CC_DA4DC5:DG13DT14_DD	0.165	-1.233	4.856	1.663	-0.956	31.355	-2.01	0.159	4.893	-1.767	-3.073	31.412
1	6	CC_DA6DC7:DG11DT12_DD	-0.986	-0.605	3.085	3.083	7.368	37.339	-1.777	1.865	2.832	11.35	-4.749	38.154
1	13	CC_DA13DC14:DG4DT5_DD	0.476	-1.732	3.448	-3.484	-0.763	26.924	-3.488	-1.937	3.408	-1.63	7.441	27.155
1	16	CC_DA16DG17:DC1DT2_DD	-0.012	-1.532	3.7	8.235	-0.459	32.37	-2.581	1.571	3.609	-0.807	-14.48	33.377
1	1	CC_DC1DT2:DA16DG17_DD	0.431	0.636	3.898	4.217	13.398	27.881	-2.008	0.203	3.822	25.834	-8.131	31.156
1	3	CC_DC3DA4:DT14DG15_DD	0.16	0.277	2.592	0.328	9.783	26.193	-1.309	-0.269	2.53	20.691	-0.693	27.932
1	5	CC_DC5DA6:DT12DG13_DD	0.978	2.16	2.446	-2.587	-2.834	37.599	3.596	-1.748	2.213	-4.384	4.001	37.787
1	7	CC_DC7DG8:DC10DG11_DD	0.003	0.106	4.907	-2.79	13.358	37.967	-2.133	-0.482	4.672	19.769	4.128	40.26
1	14	CC_DC14DT15:DA3DG4_DD	0.68	-0.306	3.386	0.351	-15.781	34.754	1.657	-0.995	3.229	-24.892	-0.554	38.07
1	8	CC_DG8DT9:DA9DC10_DD	0.734	-0.307	3.365	-1.893	-1.492	32.225	-0.28	-1.662	3.328	-2.684	3.405	32.313
1	10	CC_DG10DG11:DC7DC8_DD	1.882	-1.17	2.837	-1.44	10.916	29.588	-3.766	-3.676	2.186	20.502	2.704	31.528
1	11	CC_DG11DG12:DC6DC7_DD	-2.067	1.048	3.474	-3.518	20.025	30.49	-1.647	2.716	3.671	33.775	5.933	36.513
1	12	CC_DG12DA13:DT5DC6_DD	-1.784	-1.038	3.341	-14.986	10.598	39.086	-2.553	0.824	3.399	14.884	21.047	43.029
1	2	CC_DT2DC3:DG15DA16_DD	0.617	-1.033	3.328	0.285	22.681	36.009	-3.609	-0.827	2.316	32.977	-0.414	42.357
1	9	CC_DT9DG10:DC8DA9_DD	-0.826	0.526	2.666	6.787	-4.175	25.444	1.984	3.161	2.26	-9.195	-14.949	26.643
1	15	CC_DT15DA16:DT2DA3_DD	-0.346	-0.265	3.451	-2.707	13.631	36.486	-2.129	0.176	3.173	20.864	4.143	38.959

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.